Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01268 TATCCCTCCAAACTTAGAAACACGCGCGCGAATAGCCCTTTCTGCCAGGGTTAGGGTTTGGAGTGTTTCCGTGAACTCCCCTCGGCTCTTATCACAGGCCTTTGATTGTGTTGGAGACCGAAGGAATTTCTACGAATGGCCAGGTATCGAAGCCGGAGCAGAAGCTATAGCCCCCACCGGCGAAGCAGAACACCTCCACGAGGACGTAAGCGGTACGATGAGGAACCGCGCGATCGCTATCGTGACAGTAGGTCTTACAGAGACCGCCGTTCGCCTGCTCCATGCGGGTTGCTCGTTCGAAACCTGCCCCTTGATGCTAGGCCTGAAGATCTTAGGGTTCCATTTGAGCGCTATGGTGCTGTGAAGGACGTTTATCTTCCGAAGAATTACTACACTGGTCAGCCCAGGGGCTTTGGATTTGTGAAGTTCCGATATGCAGAACATGCAGCTGAAGCAAAACAGCAGCTTAATCATACTGTTATTGGTGGGCGTGAAATAACAGTAGTGTACGCAGAGGAAAATAGGAAAACACCACAAGAAATGCGTAAGATTACTCACACCAGTGGTCGACATGGTGGAAGTAGTAGAAGGAGAACTCCTACAAGATCCCCACGGCACAGATATCGATCTTACTCGCGTTCTCCTTCGCCAGCTAGGGATGATTCCAGATATTAA 675 0.5037 MARYRSRSRSYSPHRRSRTPPRGRKRYDEEPRDRYRDSRSYRDRRSPAPCGLLVRNLPLDARPEDLRVPFERYGAVKDVYLPKNYYTGQPRGFGFVKFRYAEHAAEAKQQLNHTVIGGREITVVYAEENRKTPQEMRKITHTSGRHGGSSRRRTPTRSPRHRYRSYSRSPSPARDDSRY 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01268 179 MobiDBLite consensus disorder prediction 144 164 - -
Bach5g01268 179 MobiDBLite consensus disorder prediction 129 179 - -
Bach5g01268 179 MobiDBLite consensus disorder prediction 22 44 - -
Bach5g01268 179 Gene3D - 2 141 IPR012677 -
Bach5g01268 179 SMART rrm2_1 51 124 IPR003954 GO:0003676
Bach5g01268 179 MobiDBLite consensus disorder prediction 1 21 - -
Bach5g01268 179 PANTHER TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED 51 169 - -
Bach5g01268 179 SMART rrm1_1 51 124 IPR000504 GO:0003723
Bach5g01268 179 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 50 128 IPR000504 GO:0003723
Bach5g01268 179 MobiDBLite consensus disorder prediction 1 48 - -
Bach5g01268 179 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 52 122 IPR000504 GO:0003723
Bach5g01268 179 SUPERFAMILY RNA-binding domain, RBD 44 153 IPR035979 GO:0003676
Bach5g01268 179 ProSitePatterns Protamine P1 signature. 2 12 IPR000221 GO:0000786|GO:0003677|GO:0005634|GO:0007283|GO:0035092
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01268 Bach-Chr5 9281035 9283358 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01268 42 138 Eukaryotic Initiation Factors Gene Family AT1G22760 29.293 2.08e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01268 K12900 - csv:101216537 201.445