Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01264 TTCTATTTCATGCTTCCGGGATCTTCCAAGCTAGCTTTATTATAATGCAAGCAGCTCAACCAGTCAGTGATGATGAAGCATCTCATCATTCACATCAGACTTCTATCCAGATAAACAAAGAGTTTTCAGATGGTGGATCCAGTGGGAGGCGTCCAGATATCTCACTTCAAATTCCACCTAGACCGTTAGGGTTTGGCAGCAGTAGAGGTGGAACGTCTCTAGATCATTCTCCAAGTTTCTCTAAAGGCATTCTTTCACCAGGAGGTATCTTGCGAGCTTTGAGCTTCAAAAGAAAAAGTAATGCAGCAGATGGTGAAAGAAGCTCCCTCCTTAGTTCAGATCCTAAAACTACTCCGGAAAGTCATAATATGGCTAATTCAACATCGTCATCGGGATGGAAAAGATGTACTTCTCTTCCTGTTACACATGCATCAAATCTCTCCCCTTCAGTTCCCACACCCCCTTCTGCTAGAACATATAATGAACAGCCTAAGTCACGAAATGAGGTTGCTGGTTCCAAGGTTTCAAGGTCACTCTCTGTACCTGGACGGAATGTTGTTATAGTAAGATCTTTGTCTTTTCCAGCCCACGGTGAAAATGCAGAACAAGATCCAAATGATGATCAAATAACTCCTGTGCCAGTAGAAGGCCCTGATGAAGAAATCCCTGAAGAGGAAGCAGTGTGCAGAATATGTCTTGATGTCTGTGATGAAAGGAGTACCCTTAAAATGGAATGCAGTTGCAAAGGTGCCCTGAGACTGGTGCATGAAGAATGTGCCATTAAATGGTTTAGCACAAAAGGAAATAAGAAATGTGAGGTTTGTGGGTATGAGGTCCAGAATTTACCTGTAACTTTGCTTCGTGTGTCCAGCTCCGCTCAAAGGGAAAGTAGACAAGTGCAGGGTCAACAGAACTTACATTCAGAGTCAGTCAGTGTCTGGCAAGACTTTGTGGTGCTCGTCTTGATAAGCACGATATGTTATTTTTTCTTCCTAGAGCAGCTACTGCTTCCTGACTTGAAGACTCGAGCAATCATCATAGCAGCACCATTTGCCTTTACCTTGGGCCTCCTTGCGTCTATTTTTGCGGTTGTTTTGGCAATAAAGGAATATATATGGACGTACGCTGCTCTCGAGTTTGTTCTGGTGGCTGGGACCGTGCACCTGTTCTATACTGTGTTGCATTTGAAGGCGATCTATACAATGCTACTCTCCTCAGTTTTGGGCTTTGGAACGGCCATGAGTATCAACTATGCGTATATCCAGTATGCATCTTGGAGATTTCAAGTTTCACAGGACACTAACCCAGCATGAGTCTCCTGAAAACAGTCGCTGGGACATGGAGTTTCTGTTAGTCCACTCACATAATGACCTTTCTGTCACTGCTTTATCAAGCCTTGTGTCTGTAAAATGTTGTTGCTAAACAGTACGTCAAGTATATAATAGAAAGC 1450 0.4338 MQAAQPVSDDEASHHSHQTSIQINKEFSDGGSSGRRPDISLQIPPRPLGFGSSRGGTSLDHSPSFSKGILSPGGILRALSFKRKSNAADGERSSLLSSDPKTTPESHNMANSTSSSGWKRCTSLPVTHASNLSPSVPTPPSARTYNEQPKSRNEVAGSKVSRSLSVPGRNVVIVRSLSFPAHGENAEQDPNDDQITPVPVEGPDEEIPEEEAVCRICLDVCDERSTLKMECSCKGALRLVHEECAIKWFSTKGNKKCEVCGYEVQNLPVTLLRVSSSAQRESRQVQGQQNLHSESVSVWQDFVVLVLISTICYFFFLEQLLLPDLKTRAIIIAAPFAFTLGLLASIFAVVLAIKEYIWTYAALEFVLVAGTVHLFYTVLHLKAIYTMLLSSVLGFGTAMSINYAYIQYASWRFQVSQDTNPA 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01264 422 MobiDBLite consensus disorder prediction 90 162 - -
Bach5g01264 422 SMART ringv_2 213 261 IPR011016 GO:0008270
Bach5g01264 422 MobiDBLite consensus disorder prediction 1 70 - -
Bach5g01264 422 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 202 269 IPR013083 -
Bach5g01264 422 PANTHER OS02G0165000 PROTEIN 41 418 - -
Bach5g01264 422 SUPERFAMILY RING/U-box 210 264 - -
Bach5g01264 422 Pfam RING-variant domain 214 260 IPR011016 GO:0008270
Bach5g01264 422 ProSiteProfiles Zinc finger RING-CH-type profile. 206 267 IPR011016 GO:0008270
Bach5g01264 422 CDD RING_CH-C4HC3_MARCH 214 261 - -
Bach5g01264 422 MobiDBLite consensus disorder prediction 84 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01264 Bach-Chr5 9254111 9258283 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01264 227 322 C3H Transcription Factor Family AT5G59000 32.292 1.56e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01264 - - gmx:100777100 608.986