Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01259 ATGGGTCGAGTTCAATTAGCTGACCTCGCTTCACTTCACGGACTGTCGTCGTCCGGATCTACGATCAGTTTAAATGAGATGGCATCTTCACATAATGTTGAGTTGGAGGCAGCGAAGTTTCTGCACAAACTCATTCAAGATTCTAAAGATGAGCCAGTCAAGTTGGCTACGAAACTCTATGTGATACTGCAACACATGAAATCAAGTGGGAAGGAACATTCAATGCCATATCAAGTGATATCAAGGGCCATGGAGACTGTTGTCAATCAGCATGGTCTTGATATTGAAGCATTGAAGTCATCACGTCTTCCTTTGACTGGTGGAGGTCAAATAGGATCTTCACAGGCAACAGGTGTACCAACAGATTCCAGAGTGGGCTCAGCTGAAAATGAGATGTCCAAAATGGACCACTTTACTTCTGGCCGCCCACCAGTTGTCCCAAATAGTGGGGCACCTGATTATTATCAAGGATCTGTAGCTCAGAGGAGCAGTCAGTCTTTTGATCAAGGGAGTCCGTCCAGTTTGGACTCTAGGTCTGCAAACTCGCAATCTCAAGATAGACGTGACACTGCTAACTGGGACAAACAGGTGGCTCAAAAGGATGGTAAGAAAGCTGCTACAAAGAGAAAGAGAGGAGATTCATCATCACCCTTGGAACAAAATGTTGACATTCCTGCTCAACTTGATCCCCGCAATACTGTTATTAATGCAAGGAAGGGTAAAATGAACAAGGCTGAACCATCAGATAGCCATCCAGTTAAAAGTGGCGAACAGACAAACTTCAACGTGGTTCCAAGTAGTGGTCAAATGGAGCATCTTTCAGCTTTGTCTGGTAGCATGAGAGCAATGCATAGAGCCAACCAAGAAAGCCATCATTTACTGGAAAAGCAAGCAGATGTGACCAAGATTGGCAATCCAATGCATCATACTCCTAGCTTGAAGTATCCTGAGGATACAGAAGTTTCCTCTGCACATATTGCTCCAGGACAGCAGCAAGGTGTTTACAGTAAGGTTCATGGAGGGATGCTGGTTGCTACTAGTGCATATCCTATGGGAGAACCGGTGTTCCCAAGTTCAATGCAGTATGGTGGTGCAGTTGAGCAAGAAGGAGGAAAGTCAGCTACTCTTGCAGATAGTCAGAAAATAGCTCAGGTTGGCAGGCAAAGCAGTTCCTTGGACTCTACTATGCTTAGGAAAGGTGTTCCTCCTAGAGATGCTGGAAAATCCCCTGTATCTGGTGCACCTGCATCATCTGCTATGCCTTTCAAAGAGCAACAGTTGAAACAGCTTCGGGCTCAGTGCCTTGTTTTTCTAGCATTTAGAAATGGTCTGGCGCCAAAGAAATTACATCTGGAAATTGCACTAGGAACCACTTTTGCTAGAGAAGATAGTACTTGCAAAGAGCTGATTGATCACAAGGGAAAATCACAATCTTTGACTGAACTGAGTAACACATCTGGGGTCATGACGCCATTTGGAGGACTGAACAATCCAAGACAAATTGATAAAAATCCTTCAGCATCTTCTTCTGGAAAAACTGACTCATTGCCAAGGGGAACTGAGAGCCCAAGAACGATGGAGGATAAAACTAACCTGCATTCTGATGTCCATTCACTTGCAGAAGAAAGGAAACATTTCCATGCCACAAAAAGAGCAGAGTTTGAAAGACAAATTCAAGAAAGACTGGTATCACAGGCTTCTTTAACCACAACATTTCAGCAGCGAGATCCTTTGAATGCAAGGGGTTCCTTAGTTGCTAATAATCCTTTGGATGATGTTGACAATAGTAATCTGCAGGGTGGAAAGTCTAACCAAACTTCTGTCATGGGCCTGAACAAGCAGGTGAATCATGAGATGATTAGCTGGACTGGATTTGGCAGTCATAACGAGGCTTTGAAGGGATCCCTACAAGTCTCTTCCGTTCAGCATGAGTTACCTACAGAAAGAAGAGAGACTGTTCCTAGTCAGTTTCAAAATATTGGCACTAGCAGTGCTTCAGGGAATCAGCATTCTGTTAATCACTTAACTTCTTATTTGTTAAAAGAGCAATGGAAACCTGCTTCAGGAACTGACAATGATCCTCTTGGAGTAGCCATTATGAAGGATCCAAGTGTAATGGCAAGACATGTTTCTACTGATGGGTTCAGAGCAGTTCTAGTTGATGATGCATCAAAGCAAGGCATTTCTCTTGCTACTGAGCAAGATGTGAATGAGAGGATGGTTTCAGATTTTCCACGGTCTCCAAAATATACTATGTCAGAAAGATGGACTATCGATCAGCAGAGAAAGAGGCTTCTAGTTGAGCAAAATTGGATGCAGAAACAGCAGAAGGCAAAACGAAAAATTGCTACATGTTTTAACAAGTTAAAGGAAAATGTGAGCTCCTCTGAGGATATATCTGCTAAAACAAAAAGTGTCATAGAGTTGAAAAAACTTCAACTATTGGATCTCCAACGTCGACTCCGCAGTGATTTTCTCAATGATTTCTTCAAACCAATTACTCCTGAGATGGAGCATTTGAAATCAATTAAGAAACATAGGCATGGTAGGAGGATCAAACAACTTGAAAAGTTTGAGCAGAAAATGAAGGAAGAGCGTCAGAAGAGAATTCGTGAGAGACAAAAGGAGTTTTTCAGTGAGATAGAAGTTCACAAGGAAAGACTAGATGATGCATTCAAAATTAAGAGGGAGCGGTGGAAGGGTTTCAATAGATATGCGAAGGAATTCCATAAAAGAAAAGAACGTATTCATCGTGAGAAGATTGACCGAATCCAGCGTGAGAAGATTAATTTGTTGAAAATAAATGATGTGGAAGGCTATTTAAGAATGGTGCAGGATGCAAAATCAGATCGTGTTAAGCAACTTCTCAAAGAGACTGAGAAGTATCTTCAAAAGCTTGGGTCTAGGCTACAGGAAGCAAAGACTGCAGCAGGACGTTTTGAGCATGATGTGGATGAGGTAGGAAGTGGCAATGTTGTCGACAAGAGCGACTTTACTTTTGAGAACGAGGATGAAAGTGATCAAGCAAAGCATTATAAGGAAAGCAACGAGAAGTATTATATGATGGCCCATAGTATAAAGGAAAGCATTGCGGAACAGCCATCTTGCCTGCAAAGTGGAAAGTTGAGGGAGTATCAAATGAACGGCCTGAGGTGGTTGGTTTCCCTATACAACAATCACTTGAATGGAATTCTTGCTGATGAAATGGGACTAGGAAAAACTGTTCAGGTTATTGCTCTTATTTGTTACCTTATGGAAGCCAAAAATGATAGAGGACCTTTTCTTGTGGTTGTGCCATCTTCGGTTCTACCTGGTTGGGAGTCGGAGATTAGTCTTTGGGCTCCTGCTGTACATAAAATTGTCTATTCTGGACCTCCTGAGGAGCGGCGACGTTTATTCAAGGAAAAAATTGTTCACCAGAAATTCAATGTCCTTTTGACTACGTATGAGTATCTAATGAACAAGCATGATAGACCAAAATTGAGCAAAATACACTGGCACTATATAATAATTGATGAAGGCCACCGTATAAAGAATGCTTCATGCAAATTGAATGCAGAGTTGAAACACTACCAGAGCTCTCACAGATTATTGTTAACTGGAACACCGTTGCAGAATAATCTTGAGGAACTGTGGGCGCTGCTTAACTTCTTGTTGCCCAACATATTTAATTCATCGGAAGATTTTTCTCAATGGTTCAATAAACCATTTGAGAGTAATGGAGATAATTCACCTGATGAAAAAGCTTTACTTTCTGAAGAGGAGAATCTCTTGATCATAAATCGTCTACACCAAGTTCTGAGGCCATTTGTACTTCGGAGGCTGAAACATAAGGTTGAAAATGAGCTGCCTGAAAAGATTGAGAGACTTGTAAGATGTGAGGCTTCTGCATATCAAAAGCTTTTGATGAAGAGGGTGGAAGAAAATCTGGGTTCGATGGGAACTTCAAAGGCTCGGTCGGTACACAACTCTGTCATGGAGCTTCGTAATATATGCAATCATCCGTATCTTAGCCAGCTTCATGTGGAGGAGGTGGACTGCTATATACCTAAGCATTATTTGCCGCCAATTATTAGACTTTGTGGGAAGCTTGAGATGTTGGACAGACTATTACCTAAACTGAAGGCAACAGATCATCGGGTATGA 4146 0.4192 MGRVQLADLASLHGLSSSGSTISLNEMASSHNVELEAAKFLHKLIQDSKDEPVKLATKLYVILQHMKSSGKEHSMPYQVISRAMETVVNQHGLDIEALKSSRLPLTGGGQIGSSQATGVPTDSRVGSAENEMSKMDHFTSGRPPVVPNSGAPDYYQGSVAQRSSQSFDQGSPSSLDSRSANSQSQDRRDTANWDKQVAQKDGKKAATKRKRGDSSSPLEQNVDIPAQLDPRNTVINARKGKMNKAEPSDSHPVKSGEQTNFNVVPSSGQMEHLSALSGSMRAMHRANQESHHLLEKQADVTKIGNPMHHTPSLKYPEDTEVSSAHIAPGQQQGVYSKVHGGMLVATSAYPMGEPVFPSSMQYGGAVEQEGGKSATLADSQKIAQVGRQSSSLDSTMLRKGVPPRDAGKSPVSGAPASSAMPFKEQQLKQLRAQCLVFLAFRNGLAPKKLHLEIALGTTFAREDSTCKELIDHKGKSQSLTELSNTSGVMTPFGGLNNPRQIDKNPSASSSGKTDSLPRGTESPRTMEDKTNLHSDVHSLAEERKHFHATKRAEFERQIQERLVSQASLTTTFQQRDPLNARGSLVANNPLDDVDNSNLQGGKSNQTSVMGLNKQVNHEMISWTGFGSHNEALKGSLQVSSVQHELPTERRETVPSQFQNIGTSSASGNQHSVNHLTSYLLKEQWKPASGTDNDPLGVAIMKDPSVMARHVSTDGFRAVLVDDASKQGISLATEQDVNERMVSDFPRSPKYTMSERWTIDQQRKRLLVEQNWMQKQQKAKRKIATCFNKLKENVSSSEDISAKTKSVIELKKLQLLDLQRRLRSDFLNDFFKPITPEMEHLKSIKKHRHGRRIKQLEKFEQKMKEERQKRIRERQKEFFSEIEVHKERLDDAFKIKRERWKGFNRYAKEFHKRKERIHREKIDRIQREKINLLKINDVEGYLRMVQDAKSDRVKQLLKETEKYLQKLGSRLQEAKTAAGRFEHDVDEVGSGNVVDKSDFTFENEDESDQAKHYKESNEKYYMMAHSIKESIAEQPSCLQSGKLREYQMNGLRWLVSLYNNHLNGILADEMGLGKTVQVIALICYLMEAKNDRGPFLVVVPSSVLPGWESEISLWAPAVHKIVYSGPPEERRRLFKEKIVHQKFNVLLTTYEYLMNKHDRPKLSKIHWHYIIIDEGHRIKNASCKLNAELKHYQSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEKALLSEEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEENLGSMGTSKARSVHNSVMELRNICNHPYLSQLHVEEVDCYIPKHYLPPIIRLCGKLEMLDRLLPKLKATDHRV 1381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01259 1381 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1054 1221 IPR014001 -
Bach5g01259 1381 MobiDBLite consensus disorder prediction 382 420 - -
Bach5g01259 1381 MobiDBLite consensus disorder prediction 476 520 - -
Bach5g01259 1381 PANTHER SNF2/RAD54 HELICASE FAMILY 702 1381 - -
Bach5g01259 1381 SMART QLQ_2 420 455 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bach5g01259 1381 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1276 1381 IPR027417 -
Bach5g01259 1381 MobiDBLite consensus disorder prediction 106 128 - -
Bach5g01259 1381 FunFam Chromatin structure-remodeling complex protein SYD 1033 1283 - -
Bach5g01259 1381 ProSiteProfiles HSA domain profile. 860 934 IPR014012 -
Bach5g01259 1381 MobiDBLite consensus disorder prediction 188 216 - -
Bach5g01259 1381 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1019 1274 IPR027417 -
Bach5g01259 1381 MobiDBLite consensus disorder prediction 471 531 - -
Bach5g01259 1381 Gene3D - 1033 1283 IPR038718 -
Bach5g01259 1381 Coils Coil 855 875 - -
Bach5g01259 1381 Gene3D - 1284 1381 IPR027417 -
Bach5g01259 1381 Coils Coil 956 976 - -
Bach5g01259 1381 Pfam SNF2-related domain 1046 1337 IPR000330 GO:0005524|GO:0140658
Bach5g01259 1381 CDD DEXHc_SMARCA2_SMARCA4 1040 1276 - -
Bach5g01259 1381 MobiDBLite consensus disorder prediction 382 396 - -
Bach5g01259 1381 MobiDBLite consensus disorder prediction 154 187 - -
Bach5g01259 1381 SMART ultradead3 1038 1232 IPR014001 -
Bach5g01259 1381 MobiDBLite consensus disorder prediction 106 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01259 Bach-Chr5 9195609 9207719 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01259 1062 1337 RAD5 or RAD16-like Gene Family AT5G22750 27.907 1.48e-24 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Bach5g01259 SNF2_N 4.1e-69 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01259 - - gmx:100790172 2036.15