Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01233 CTAATACACCTCCTTTTGAGTGTTGACTACCGTGATCCGACTGAATGAAACGGCGTCGCTACATCTGTCTCCCCCTCTCTTCCTTCGAACCAGTTATGGAATCGTCTTCTCGTCGGAGAAAGACATGGCAAAGAATGGAGCAGGAGAAGATGGTGAGGAAGGTAATTTGGCGTGCGATTCGGGGGCGTTCTTGTCCAATATGTTTCAGGGACCTCGAAGTTCATTACAGAGTAGCTGCGGTTCTTACTGTGTGTATGCACGCATACTGCATCGGATGCATTCGCAAGTGGATTAAATTGAGAAGAAAATGTCCGCTTTGTAATGCGGAGTTCAATTCCTGGTTCTGCAAGCTCAGTCTTTCCTCTAGAGGGTTCCAGAAGGAGGTGTTGCCCTTCAATGGTTTGCCTACTAATTCCAATGAGGAAATGGGTACAGATCGGATAGATTCTCGAAGAATTCTTGCAAGAACTAGAGCTGCATTAAACAATAGCATAACAAGGGCATTGCCATGGAGAAGATCATTTGGGCGTCCTGGACTTGTAAGTCCAGAGATCGTTGCTCAGAGGAAACTTGAATGGCGTGCCAGCATATACAACCGGGGGATCCAAGCAATTCCTTCAACCTCAAGCTGTCCTGAGCAGAATAGATTGAGAAATAATGCTGAAAAAGAAAAATTATTACAAAGGATTGAGCCATGGATACGAAGGGAGCTGCAAGCTGTCCTGAGTGACCCAGATCCATCTGTCATTGTCCACGTGGCAACCTCACAGTACATTGCCTGGCTAGAAGAGAAAGCTAAATTGCCATCAGAGGAACTTGATGTTCAAGACAGATTCATGTCAGCTCTGTGTCGCTTCCTGCATGATAAAACCAGTATCTTTTGGCATGAATTAAGATGTTTTGCAGAGTCTTCTTACAACATGGAAACCTATGATACAGTAGTTGAATATGAACAGCTGCAGTGAGTGAACAAGAGAAGTATTTTAAACCTCCAAGAATCTGTTTCTAAGTTAAAAAGCGAGGCTCTGAACCGGGATAAGATGCAGTGCCCTCCGCACACCCTTCCGAGCTCTATTTACGTGTTCCTCCAAATTTGGGGGTTTGAGATGAAGGAAATAGAATAATTTGATCATTTTGCCCTTACTCACTTTATTGTACATGGCGTCCTAGCTCTTTTACTA 1181 0.4428 MKRRRYICLPLSSFEPVMESSSRRRKTWQRMEQEKMVRKVIWRAIRGRSCPICFRDLEVHYRVAAVLTVCMHAYCIGCIRKWIKLRRKCPLCNAEFNSWFCKLSLSSRGFQKEVLPFNGLPTNSNEEMGTDRIDSRRILARTRAALNNSITRALPWRRSFGRPGLVSPEIVAQRKLEWRASIYNRGIQAIPSTSSCPEQNRLRNNAEKEKLLQRIEPWIRRELQAVLSDPDPSVIVHVATSQYIAWLEEKAKLPSEELDVQDRFMSALCRFLHDKTSIFWHELRCFAESSYNMETYDTVVEYEQLQ 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01233 306 ProSitePatterns Zinc finger RING-type signature. 70 79 IPR017907 -
Bach5g01233 306 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 22 99 IPR013083 -
Bach5g01233 306 ProSiteProfiles Zinc finger RING-type profile. 50 93 IPR001841 -
Bach5g01233 306 PANTHER E3 UBIQUITIN-PROTEIN LIGASE TOPORS 18 304 - -
Bach5g01233 306 SUPERFAMILY RING/U-box 49 99 - -
Bach5g01233 306 Pfam Ring finger domain 49 93 IPR001841 -
Bach5g01233 306 SMART ring_2 50 92 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01233 35 283 C3H Transcription Factor Family AT2G39100 47.656 2.08e-72 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01233 - - cave:132168067 345.125