Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01230 ATGTTTAATCCTTATCGCAACACCTTGTTCCACCTAAAGGGTATTCGGAAAGCTTCTCCAATTCCAAGGCTATGTATTCTCTTACAACAGGACCCATCAACATTTGCGCTCAAGTACAGCACAGCTACTCCAAAGGAACAATCTTTCACGGTGAACTACCTCATCAACAATCTCGGATTCTCTCCAGAAATCGCTTTGAAACTTTCCAAGCAGGCCCATTTCGAAACCTCAGAAAAGCCAGACACTGTGGTTACCTTCTTCAGAAACCTTGGTTTTTCAAACTCAGAGGTGTCTGATATTATCAGAAGGATTCCAAAATTCCTTCTATGCAATCCGGTGAAGTCCATTTCGCCCAAGATAGAATTTTCCCAGTCTAAAGGTGTTTCAAGCTCCGATAATGTCAGCATTGTGAAGGGGAGTCCCTGGATCTTACGAAGAAGCTTAAAGAATTGTCTAATTCCTTGTTATGATTTTCTCAAAGGATTTCTTCATTCTGATAGGAGAACCATTACATCTATAAAACGTTGTCCCAACATGTTTAGAAGTGATCGAATAATTCAAAATGTCAAATACTTGGTTGAAATCGGGTTGCCTGAATCAGGTATTGCTAAATTACTTTACTGTTGGCCTAGATCAATCGACTATGGTATATTTAAATTTAAAATGGCTATCAAGGAAGTAGAAGAATTGGGATTTGATCCTTCAAGGTACAATTTTGCTCCTGTATTCTTTGCCTTAACTGTAATAAGCAAATCCACTATGCAAAGGAAGGTTGATGTGTATAAGAGGTGGGGTTGGTCTGATGAAGCAATTTCTAAGGCATTAGCTGCATATCCTGGTAGTATGCTAGTATCTGAGCAGAAAATTGAGTCGATGATGGAGTTTTTTGTCAATGACATGGGGTGGGAGTCTGAGAAACTTGCCAAAAGTACCCTACTTTTTCCATTTAGTTTGGAGAAAAGAGTTATCCCGAGGGCTTCTGTCTTGCAATTTCTTCAAGCAAAGGGTTTGATTAAGGATGCTAAACTTACTGGACCATTTAGGTTGTCTGAAAAAGTGTTCCTGCAGAAATATGTAATCTGTTTTAAGGATAGAGCTCCTCAGTTATTGAAGCTGTATGAATCAAAACTAAATCTCTCAAAATAA 1146 0.3866 MFNPYRNTLFHLKGIRKASPIPRLCILLQQDPSTFALKYSTATPKEQSFTVNYLINNLGFSPEIALKLSKQAHFETSEKPDTVVTFFRNLGFSNSEVSDIIRRIPKFLLCNPVKSISPKIEFSQSKGVSSSDNVSIVKGSPWILRRSLKNCLIPCYDFLKGFLHSDRRTITSIKRCPNMFRSDRIIQNVKYLVEIGLPESGIAKLLYCWPRSIDYGIFKFKMAIKEVEELGFDPSRYNFAPVFFALTVISKSTMQRKVDVYKRWGWSDEAISKALAAYPGSMLVSEQKIESMMEFFVNDMGWESEKLAKSTLLFPFSLEKRVIPRASVLQFLQAKGLIKDAKLTGPFRLSEKVFLQKYVICFKDRAPQLLKLYESKLNLSK 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01230 381 Gene3D Transcription termination factor 3, mitochondrial 166 367 IPR038538 -
Bach5g01230 381 PANTHER CGI-12 PROTEIN-RELATED 46 363 IPR003690 GO:0003690|GO:0006355
Bach5g01230 381 SMART mt_12 304 338 IPR003690 GO:0003690|GO:0006355
Bach5g01230 381 SMART mt_12 134 165 IPR003690 GO:0003690|GO:0006355
Bach5g01230 381 SMART mt_12 170 198 IPR003690 GO:0003690|GO:0006355
Bach5g01230 381 SMART mt_12 272 303 IPR003690 GO:0003690|GO:0006355
Bach5g01230 381 SMART mt_12 98 129 IPR003690 GO:0003690|GO:0006355
Bach5g01230 381 SMART mt_12 203 233 IPR003690 GO:0003690|GO:0006355
Bach5g01230 381 FunFam Mitochondrial transcription termination factor-like 148 366 - -
Bach5g01230 381 Pfam mTERF 85 291 IPR003690 GO:0003690|GO:0006355
Bach5g01230 381 Pfam mTERF 248 354 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01230 Bach-Chr5 8944050 8945195 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Bach5g01230 mTERF 2.5e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01230 K15031 - qsa:O6P43_021713 342.043