Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01228 ATGTCCACCTCTAGGGCCTCAGAAATACCCTTCAAAGTATTTGAACCAAACCAGAACCAGATGGGTTTAGCTCTTATTCAGCATAACACATCTCCTTCTGGGGAGAGAAGAGGGAGAAGGAGGCAAGCTGAGCCAGGGAGGTTTCTTGGAGTTAGAAGGCGCCCTTGGGGAAGATATGCTGCAGAAATTAGAGACCCTACAACTAAAGAAAGGCATTGGCTTGGCACGTTTGACACTGCTCAAGAAGCAGCTCTGGCTTATGACAGAGCTGCTCTGTCCATGAAAGGTAGCCAGGCAAGAACCAACTTTGTTTACACTGACAACACCACCTTCCACACTCTTCTTGCTCCTGTGGATGTTCAAGCACTCTTGCCAGTATCTCAGTTCTTCACTAACCCCCAGAGCAAGCCACCAAAAAACCAGAATGGCCCTAATTCTTCCTTCATAGAGAACTCCATCCAATTGAAAAGTGACATATGTGCTGAAACTGCATATGGGTCAGCAGCTCAGGATGATGATAATTTCCTCTTCTCCAATGATTCTAACTCAGGCTACTTGGAATGCATAGTTTCTTCCAGCTGCAACTCCAGAAAGAGCAATGCAGGTACTTCAAATGAGCAAAAGGTTAGCTCTATCAACACAAACTCCATGGCCTCTCACTTTGGAGATTTTCCTTATAGAAATGAACTCAGTCAAGGATTATGGGATAACCAGCAGGCATGGGATATGAATTGCAGCGACCTTTCTGCTATTATCAATAATAACCCATTAAGAGCGGAAGATGAATGCATGGGTGCTTTATATCCCTTAAATGATAGTCCAAGCTATGGCCTAATGACTCAAGCAGCTTCCTCTACAACCTGCACTCCATCACTTCCTCCTTTTGGGGATGTTGACTTGGGGTATTCACTCTTCTGA 918 0.4488 MSTSRASEIPFKVFEPNQNQMGLALIQHNTSPSGERRGRRRQAEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAQEAALAYDRAALSMKGSQARTNFVYTDNTTFHTLLAPVDVQALLPVSQFFTNPQSKPPKNQNGPNSSFIENSIQLKSDICAETAYGSAAQDDDNFLFSNDSNSGYLECIVSSSCNSRKSNAGTSNEQKVSSINTNSMASHFGDFPYRNELSQGLWDNQQAWDMNCSDLSAIINNNPLRAEDECMGALYPLNDSPSYGLMTQAASSTTCTPSLPPFGDVDLGYSLF 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01228 305 PRINTS Ethylene responsive element binding protein signature 70 86 IPR001471 GO:0003700|GO:0006355
Bach5g01228 305 PRINTS Ethylene responsive element binding protein signature 48 59 IPR001471 GO:0003700|GO:0006355
Bach5g01228 305 ProSiteProfiles AP2/ERF domain profile. 47 104 IPR001471 GO:0003700|GO:0006355
Bach5g01228 305 SMART rav1_2 47 110 IPR001471 GO:0003700|GO:0006355
Bach5g01228 305 SUPERFAMILY DNA-binding domain 48 104 IPR016177 GO:0003677
Bach5g01228 305 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 33 205 - -
Bach5g01228 305 FunFam Ethylene-responsive transcription factor 2 47 105 - -
Bach5g01228 305 CDD AP2 47 103 IPR001471 GO:0003700|GO:0006355
Bach5g01228 305 Gene3D AP2/ERF domain 47 105 IPR036955 GO:0003700|GO:0006355
Bach5g01228 305 Pfam AP2 domain 50 96 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01228 Bach-Chr5 8929730 8930647 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01228 1 298 AP2-EREBP Transcription Factor Family AT5G18560 41.899 4.26e-59 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach5g01228 AP2 1.2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01228 - - qsa:O6P43_021710 369.007