Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01226 ATGGAGCGGTACGGCCGGGCTAGTGAAGGGTCGCAGTCTGATCCGTCGCCGGAATGGACCGGGGACGGTGGCGAAACAGGGCTGGTAGAGCCTATGTGGCGATTGGGATTGGGTGGTGGTGAATCGTATCCGCAGCGGCCCGATGAGGCTGATTGTATCTATTATTTGAGGACAGGATTTTGTGGGTATGGCTCCCGGTGTCGGTTCAATCATCCCCGTGACCGAGGCGCGGTTATTGGAGCTGCAAGGACTGGAGGGGAGTATCCAGAGCGAGTAGGTCAGCCTGTGTGCCAGTATTATATGAGGACAGGATCATGCAAATTTGGTGCTTCCTGCAAGTACCACCATCCTAGGCAGGGAGGAGGCACAGTTGCTCCCATGTCACTAAATTATTATGGATATCCATTGAGACCGGGTGAAAAAGAGTGTTCCTATTATGTGAAAATGGGGCAATGCAAGTTTGGTGCAACTTGTAAATTCCACCATCCACAGCCTGTTGGTGTCCCAGTTCCAGCACCATCACCAGTTCCCCCAGTTTCACCTCTACATGTACCAGTACCATCGCCAATATATCCAACTATGCAACCTCCATCTGGTCCTTCATCCCAACAATATGGTGTAATGGTTGCAAGGCCACCTTTATTACCTGGTTCATTAGTCCAAGGTCCCTATGGACCAGTAATAGTTTCACCTGCTATGGTTCCTTTCTCAGGTTGGGATCCTTATCAGACTCCTCCAAGCCCTGTTGCTCCTTCTAGTACTCCGTCAAATGTTAGTTCAATGCAGTTTTATGGTGTTGCCCAGCTACCTTCACCTGCACCTTCATATGCTGGACCTTATCAACCTTCAGGTTCCTCAGTTGGTCCTTCAGGTAGTAGTCAGAAGGAGTATTCATTTCCAGAAAGACCTGGTCAACCAGAATGTCAATATTACATGAAAACGGGGGACTGTAAATTTGGTCCATCATGTAGATATCATCATCCTCCTGAACTAATTGTGTAG 1002 0.489 MERYGRASEGSQSDPSPEWTGDGGETGLVEPMWRLGLGGGESYPQRPDEADCIYYLRTGFCGYGSRCRFNHPRDRGAVIGAARTGGEYPERVGQPVCQYYMRTGSCKFGASCKYHHPRQGGGTVAPMSLNYYGYPLRPGEKECSYYVKMGQCKFGATCKFHHPQPVGVPVPAPSPVPPVSPLHVPVPSPIYPTMQPPSGPSSQQYGVMVARPPLLPGSLVQGPYGPVIVSPAMVPFSGWDPYQTPPSPVAPSSTPSNVSSMQFYGVAQLPSPAPSYAGPYQPSGSSVGPSGSSQKEYSFPERPGQPECQYYMKTGDCKFGPSCRYHHPPELIV 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01226 333 Gene3D - 122 170 - -
Bach5g01226 333 MobiDBLite consensus disorder prediction 278 299 - -
Bach5g01226 333 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 48 73 IPR000571 GO:0046872
Bach5g01226 333 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 94 118 IPR000571 GO:0046872
Bach5g01226 333 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 304 329 IPR000571 GO:0046872
Bach5g01226 333 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 139 164 IPR000571 GO:0046872
Bach5g01226 333 SUPERFAMILY CCCH zinc finger 306 329 IPR036855 GO:0046872
Bach5g01226 333 ProSiteProfiles Zinc finger C3H1-type profile. 91 119 IPR000571 GO:0046872
Bach5g01226 333 Gene3D - 44 121 - -
Bach5g01226 333 Gene3D - 289 332 - -
Bach5g01226 333 SUPERFAMILY CCCH zinc finger 94 119 IPR036855 GO:0046872
Bach5g01226 333 SUPERFAMILY CCCH zinc finger 139 164 IPR036855 GO:0046872
Bach5g01226 333 PANTHER PROTEIN PHOSPHATASE RELATED 39 332 - -
Bach5g01226 333 ProSiteProfiles Zinc finger C3H1-type profile. 137 165 IPR000571 GO:0046872
Bach5g01226 333 SMART c3hfinal6 46 73 IPR000571 GO:0046872
Bach5g01226 333 SMART c3hfinal6 302 329 IPR000571 GO:0046872
Bach5g01226 333 SMART c3hfinal6 91 118 IPR000571 GO:0046872
Bach5g01226 333 SMART c3hfinal6 137 164 IPR000571 GO:0046872
Bach5g01226 333 FunFam Zinc finger nuclease 2 45 122 - -
Bach5g01226 333 SUPERFAMILY CCCH zinc finger 48 74 IPR036855 GO:0046872
Bach5g01226 333 ProSiteProfiles Zinc finger C3H1-type profile. 302 330 IPR000571 GO:0046872
Bach5g01226 333 MobiDBLite consensus disorder prediction 275 303 - -
Bach5g01226 333 ProSiteProfiles Zinc finger C3H1-type profile. 46 74 IPR000571 GO:0046872
Bach5g01226 333 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01226 Bach-Chr5 8917184 8919011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01226 1 330 C2H2 Transcription Factor Family AT5G18550 58.065 2.76e-125 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bach5g01226 zf-CCCH 1.1e-09 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01226 - - gmx:100789405 515.383