Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01225 ATGTTTAATTCCCAACGCCACAGGGTCTTTCTCTCTCTAAAGGGCATGATAGTACCTTCACCAACCCCAAAATGCCATGATCTTTTGCGACGGTACCTATCGCCATTTTCTCTGAAACTCAGCACTAGCACTTTAGCCGTACAACATTTTACAGTTTCCTATCTCATAAATAGTTGCAGGTTCTCACAGGAAGATGCTCTGAAAGCTTTCAATTCCCAGCGAGTTCGTTTTAAGTCATCACAGAAGCCGGATTCAGTTGTCGCCTCCTTCAGAAACCGTGGTTTCTCAGATTCTGATATATACAATATGATTAGAAAGGAACCCAGAATTCTTTCATGGGATTTTGACAGAACTCTTTGGCCCAAGTTCGAATTTTTTCTCTCCAAAGGTGCTTCTATCTCTGACATTGCCAACATGGTAATTGCACGCCCGAAACTCCTTACAAGAAGCTTGGAAAATCATATAATTCCTTCATATGAATTTATAAAGAGGTTTGTTGAATCTGACAAGAAGATAATTAATTGTTTGACGCTATCTATGGTTTTCGCTTCTTGTGAATTTGTGGCAGCTAATGTGAAAATGTTGCTAGATAAGGGAGTGGCTGAATCTTACATTAAAAGCATTTGTTGTTCATGGCCTAGTGTATTCTCCTCATATGACTTTGGGATGATGGTGGAAGAATTAGAGAAATTGGGATTTGATCCTTCTAAATCAGTCTTTAGTGCGGCATTGATAGCAAAAGTGACTGTATCAAAACAAAAGTGGGATGAGAAAGTTGATACCTATAAGAGCTGGGGTTGGTCTGAAGAAGTGATTTTGGAAGCTTTTAGGAGGCAGCCAACCTGTATGTTACGATCCAATGATAAAATCAATGCAGTGATGAGATTTTGGGTCATCCAGTTAGGATGGAATTCTTTGATGATTGTCAAAAGACCAGAAATATTGGGTTTTAATTTGAAGGAAAGGATTGTTCCAAGGGCTATGGTCTTGCAGTTTCTTCTGTCAAAAGGTTTGATGAACAAGAATTCTAGCTTAACTAGACCATTTATGTTGACTGAAAGGCTGTTCCTGCAAAAGTATGTGCAACGTTTTGAGGAGGAAACTTCTCATCTCTTAAAGCTATACGGGGAAAAAATTAATCTTCAGACCAATAGGGAAAAGACTGACATATGA 1173 0.3879 MFNSQRHRVFLSLKGMIVPSPTPKCHDLLRRYLSPFSLKLSTSTLAVQHFTVSYLINSCRFSQEDALKAFNSQRVRFKSSQKPDSVVASFRNRGFSDSDIYNMIRKEPRILSWDFDRTLWPKFEFFLSKGASISDIANMVIARPKLLTRSLENHIIPSYEFIKRFVESDKKIINCLTLSMVFASCEFVAANVKMLLDKGVAESYIKSICCSWPSVFSSYDFGMMVEELEKLGFDPSKSVFSAALIAKVTVSKQKWDEKVDTYKSWGWSEEVILEAFRRQPTCMLRSNDKINAVMRFWVIQLGWNSLMIVKRPEILGFNLKERIVPRAMVLQFLLSKGLMNKNSSLTRPFMLTERLFLQKYVQRFEEETSHLLKLYGEKINLQTNREKTDI 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01225 390 Pfam mTERF 90 177 IPR003690 GO:0003690|GO:0006355
Bach5g01225 390 Pfam mTERF 188 356 IPR003690 GO:0003690|GO:0006355
Bach5g01225 390 Gene3D Transcription termination factor 3, mitochondrial 168 374 IPR038538 -
Bach5g01225 390 FunFam Mitochondrial transcription termination factor-like 151 368 - -
Bach5g01225 390 SMART mt_12 206 234 IPR003690 GO:0003690|GO:0006355
Bach5g01225 390 SMART mt_12 137 168 IPR003690 GO:0003690|GO:0006355
Bach5g01225 390 SMART mt_12 101 132 IPR003690 GO:0003690|GO:0006355
Bach5g01225 390 SMART mt_12 273 304 IPR003690 GO:0003690|GO:0006355
Bach5g01225 390 SMART mt_12 305 339 IPR003690 GO:0003690|GO:0006355
Bach5g01225 390 PANTHER CGI-12 PROTEIN-RELATED 50 363 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01225 Bach-Chr5 8908648 8909820 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Bach5g01225 mTERF 2e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01225 K15031 - gmx:102667698 356.295