Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01223 ATGTTTAGCTCGCAACGCCGCCAAACCCTTCAATACTTGAAGGGTATCCTAACAATATCAGCAACCCAGGCTTTCTCTCTGAATTTCAGCACAAGCACTGCGGATAAAACCTCCTTTAGAGTGACCTACCTCATTAACAATGGATTCTCACCAGAAGCTGCTTTACATGTTTCTAAGCGAGTTCGTTTTGAGACCTCGACAATGCCGGATTTAGTTCTTACCTTTTTGAGAAACAGTGGTTTCTCAGACTCTCAGCTACAGAGTCTCATCAGGAAGGGACCATGGCTGCTTTCATGCGACCCCAACAAAATAATTCTGCCCAAGTTTGAATTCTTACGCTCTAAAGGTGCTTCTAGCTCTGACATTGCTTACATGGCGGGTTTAGCTCCGCATTTCCTAGGAAGAAGCTTGGAGAATCACATAATCCCTCAATATGAATTGGTGAAACGGTTCGTTCAAACTGATACGGCGACCATATTTTGTTTTAAACATTGTGCGAATTTACTTTATGTCAGTTATACGGCACCTAATATCCAGTTATTGGTTGATAATGGGGTTCCCGATTCAACCATTGCTAGATTGATTCGTTCTCGCCCTACTTTGTTGTCAAGGACGAAGTCGCATGAATTGATCGAATCGGTGGTGGAATTAAAGAAATTGGGATTTGATACTCGCAAACTACAATTTCTCTGGGCATTGATAGCTAAAAGGGCTATGAGTAAATCCAAGTGGGATGCCAAAGTTGATGCTTTTAAGAAGTGGGGTTGGTCTGAAGAAACGATTTTGGAAGTTTTCAGGAGGGATCCACTCTTGATGTTAGCATCCTTGGATAGAATTGACGCAGTAATGAGTTTTTGGGTCAACCAGTTGGGCTGGAATTCTTTTGAACTTGCTAAAGGACAACGAATTTTTAGATATAGTTTCGAGAAAAGAATTGTTCCAAGGGCTTCAGTTTTACACTTTCTTCTCTCAAAAGGTTTGATAAGCAAGAAAGCCAACAGACTGACGGCATTTGATCTTACTGAAAAGCTGTTCCTGCAAAGGTTTGTGGAATGTTTTGAGGAGGAAAGTTCGCAAATATCAAAGCTATACGAGGAAAAGTTGAATCTTAAACATAAAATGGAGAATGCTAGCATGTAG 1140 0.4096 MFSSQRRQTLQYLKGILTISATQAFSLNFSTSTADKTSFRVTYLINNGFSPEAALHVSKRVRFETSTMPDLVLTFLRNSGFSDSQLQSLIRKGPWLLSCDPNKIILPKFEFLRSKGASSSDIAYMAGLAPHFLGRSLENHIIPQYELVKRFVQTDTATIFCFKHCANLLYVSYTAPNIQLLVDNGVPDSTIARLIRSRPTLLSRTKSHELIESVVELKKLGFDTRKLQFLWALIAKRAMSKSKWDAKVDAFKKWGWSEETILEVFRRDPLLMLASLDRIDAVMSFWVNQLGWNSFELAKGQRIFRYSFEKRIVPRASVLHFLLSKGLISKKANRLTAFDLTEKLFLQRFVECFEEESSQISKLYEEKLNLKHKMENASM 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01223 379 Pfam mTERF 239 332 IPR003690 GO:0003690|GO:0006355
Bach5g01223 379 Pfam mTERF 73 236 IPR003690 GO:0003690|GO:0006355
Bach5g01223 379 SMART mt_12 87 118 IPR003690 GO:0003690|GO:0006355
Bach5g01223 379 SMART mt_12 123 154 IPR003690 GO:0003690|GO:0006355
Bach5g01223 379 SMART mt_12 262 293 IPR003690 GO:0003690|GO:0006355
Bach5g01223 379 SMART mt_12 294 328 IPR003690 GO:0003690|GO:0006355
Bach5g01223 379 SMART mt_12 192 223 IPR003690 GO:0003690|GO:0006355
Bach5g01223 379 FunFam Mitochondrial transcription termination factor-like 137 357 - -
Bach5g01223 379 PANTHER CGI-12 PROTEIN-RELATED 37 354 IPR003690 GO:0003690|GO:0006355
Bach5g01223 379 Gene3D Transcription termination factor 3, mitochondrial 174 362 IPR038538 -
Bach5g01223 379 Gene3D Transcription termination factor 3, mitochondrial 50 173 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01223 Bach-Chr5 8889158 8890297 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Bach5g01223 mTERF 1.5e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01223 K15031 - gmx:102667698 322.783