Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01222 ATGTTTAGCTCGCAACGCCACAAAGCCCTTCAATGGCTAAAGGGTATCCTGAAGACATCAGCAACCCCGCCTTTCTCTCTGAATTTCAACACAAGCTCTGCCGATAAAACGTCCTTAAGAGTGACCTACCTCATTAACAATGGATTCTCACCAGAAGCTGCTTTACATGTTTCCAAGCGAGTTCGTTTTGAGATCTCGACAAAGCCGGATTCAGTTCTCACCTTTTTCAGAAACAGTGGTTTCTCAGACTCTCAGCTACTGAGTATTATCAGGAAGGGACCATGGCTGCTTTCATGCGACCCCAACAAAATAATTCTGCCCAAGTTTGAATTTTTACTATCCAAAGGTGCTTCTAGCTCTGACATTGTTCACATGGTGAGTGCAGCTCCGTATTTCCTAAGAAGAAGCTTGGAGAATCACATAATCCCCAATTATGAATTGGTGAAAAGGTTCTTCCAAACAGATACGGCGACCATACTTTGTTTTAAGCGTTATGGGAATTTACTTTATATCAGTTATTTGGCACCTAATATCCAATTATTGCTTGATAATGGGGTTCCCGATTCAATCATTGCTAGATTGATTCGTTCTCGCTTCAGTTTGTTTTTAAGGACGAAGTCGCATGATTTGATCGAATCGATGGGGGAATTAAAGAAATTGGGATTTGATACTCGCAAAGTACAATTTCTCTGGGCATTGATAGCTAAAAGGGGTATGAGTAAATCCATGTGGGATGCCAAAGTTGATGCCTTTAAGAAGTGGGGTTGGTCTGAAGAAACGATTTTGGAAGTCTTCAAGAGGGATCCACTCTTGATGTTAGCATCCTTGGATAGAATTGACGCGGTAATGAGTTTTTGGGTCAACCAGTTGGGCTGGAATTCCTTGGAACTTGCTGAAGGACAACGAATTTTTAGATATAGTTTCAAGAAAAGAATTGTTCCAAGGGCTTCAGTTTTACATTTTCTTATCTCAAAAGGTTTGATAAGCAAGAAAACCAAGAAATCTACCGCGTTTGATCTAACTGAAAAGCTGTTCCTGCGAAGGTTTGTGCTATGTTTTGAGGAGGAAAGTTCTCAAATATTAAAGTTATATGAGGAAAAGTTGAAACTTAAACATAAAAAGGAGAATGGTAGCATGTAG 1140 0.4 MFSSQRHKALQWLKGILKTSATPPFSLNFNTSSADKTSLRVTYLINNGFSPEAALHVSKRVRFEISTKPDSVLTFFRNSGFSDSQLLSIIRKGPWLLSCDPNKIILPKFEFLLSKGASSSDIVHMVSAAPYFLRRSLENHIIPNYELVKRFFQTDTATILCFKRYGNLLYISYLAPNIQLLLDNGVPDSIIARLIRSRFSLFLRTKSHDLIESMGELKKLGFDTRKVQFLWALIAKRGMSKSMWDAKVDAFKKWGWSEETILEVFKRDPLLMLASLDRIDAVMSFWVNQLGWNSLELAEGQRIFRYSFKKRIVPRASVLHFLISKGLISKKTKKSTAFDLTEKLFLRRFVLCFEEESSQILKLYEEKLKLKHKKENGSM 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01222 379 FunFam Mitochondrial transcription termination factor-like 137 357 - -
Bach5g01222 379 Gene3D Transcription termination factor 3, mitochondrial 153 363 IPR038538 -
Bach5g01222 379 SMART mt_12 87 118 IPR003690 GO:0003690|GO:0006355
Bach5g01222 379 SMART mt_12 262 293 IPR003690 GO:0003690|GO:0006355
Bach5g01222 379 SMART mt_12 193 223 IPR003690 GO:0003690|GO:0006355
Bach5g01222 379 SMART mt_12 294 328 IPR003690 GO:0003690|GO:0006355
Bach5g01222 379 SMART mt_12 123 154 IPR003690 GO:0003690|GO:0006355
Bach5g01222 379 Pfam mTERF 73 236 IPR003690 GO:0003690|GO:0006355
Bach5g01222 379 Pfam mTERF 239 345 IPR003690 GO:0003690|GO:0006355
Bach5g01222 379 PANTHER CGI-12 PROTEIN-RELATED 40 354 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01222 Bach-Chr5 8879425 8880564 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Bach5g01222 mTERF 5.2e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01222 K15031 - gmx:102667698 310.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g01222 5 8879425 8880564 Bach5g01222 5 8879425 8880564 ECH