Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01216 GGGATGATTTTTGGCTTTATAATCCATTGAATTGGTGCTACATTTACTTGGAATTGCTGCATACGAATCAACCCAGCTGAGAGCTATGATGAAGTTTTATCCCTGGAGAGTTCTCTGTGAGTATCACTCTTAGTTTGGGGTTGAATGTTCAGTTCGAGTATGGATCCTGGAAGAGACGCGGGTGGTGTTGCTGGGACGGTGCTAATCCCCATGCGTTTTGTATGGCCATATGGGGGCAGAAGTGTGTATCTAAGTGGTTCTTTCAATCGGTGGTCTGAGCCCATACCAATGTCGCCAATCGAGGGTTGCCCTACTGTATTTCAAGTTATTTATAACTTGACCCCTGGTTACCATCAGTATAAGTTCTTTGTTGATGGAGAGTGGCGACATGATGAGCATCAACCTTATGTATCAGGAGAATATGGGATAGTTAACACTGTTTTCTTGGCTACTGATCCTAACTACATGCCCGTTTTAACTCCAGACATAGCTTCTGGATCTAATATGGATGTGGACAATGAAGCTTTTAGACGCCGGGTCCGGTTGACAGATGGTACATTGACTGAAGTGTTGCCAAGAATATCTGATGCGGATGTACAGACCTCTCGTCAGCGTATTGCTGCATTCTTGTCTATGCACACAGCTTATGAATTACTTCCTGAGTCAGGCAAGGTCGTTGCCTTGGATGTTGATCTGCCCGTGAAACAGGCATTTCACATATTGCATGAACAGGGAATACCTATGGCTCCTCTTTGGGACTTCTGCAAGGGGCAGTTTGATGGAGTTCTCAGCGCTTTGGATTTTATTTTAATTTTAAGAGAGCTTGGGAATCACGGATCCAATCTGACAGAAGAGGAGCTTGAAACACACACCATATCTGCGTGGAAAGAAGGAAAATCATATCTAAATAGGGAAAACAATGGGCCTGGAACTGCATTTACAAGACGTTTTATCCATGCAGGGCCATATGATAATTTGAAAGATATTGCTGTGAAGATCCTGCAAAATGAGGTTTCAACTGTTCCGATCATCCATTCATCCAGTGAAGATGGTTCATTTCCTCAGCTTTTACATCTTGCTTCGCTTTCTGGAATACTTAAGTGTATTTGCCGGTACTTCAGGCATTCTACTAATTCATTGCCTATACTCCAACTACCAATTTGCGCAATCCCTGTGGGTACATGGGTGCCCAAAATTGGGGAGTCAAATCAGCGGCCTCTAGCAATGTTGAGACCAAGTTCTTCTCTTACTTCTGCCTTAAATTTATTAGTTCAAGCACAAGTAAGCTCAATACCAATAGTTGATGATAATGACTCATTACTGGATATATATTGTCGGAGTGATATAACGGCTTTGGCAAAGGATAGAGCCTATACTCATATTAATCTTGATGAGATGAGTGTTCATCAGGCTTTGCAGTTGGGGCAAGACTCTTTTCATCCTTTTGAGCTGAGAAGTCAAAGATGTCAGATGTGTTTGCGATCTGATTCTCTTCATAAAGTGATGGAACGGTTAGCAAATCCAGGTGTGAGGCGGCTAATTATTGTGGAAGCCGGCAGCAAGCGTGTAGAAGGCATAGTTTCTCTGAGTGACATATTTAAATTCTTCCTTGGTTAG 1617 0.4267 MFSSSMDPGRDAGGVAGTVLIPMRFVWPYGGRSVYLSGSFNRWSEPIPMSPIEGCPTVFQVIYNLTPGYHQYKFFVDGEWRHDEHQPYVSGEYGIVNTVFLATDPNYMPVLTPDIASGSNMDVDNEAFRRRVRLTDGTLTEVLPRISDADVQTSRQRIAAFLSMHTAYELLPESGKVVALDVDLPVKQAFHILHEQGIPMAPLWDFCKGQFDGVLSALDFILILRELGNHGSNLTEEELETHTISAWKEGKSYLNRENNGPGTAFTRRFIHAGPYDNLKDIAVKILQNEVSTVPIIHSSSEDGSFPQLLHLASLSGILKCICRYFRHSTNSLPILQLPICAIPVGTWVPKIGESNQRPLAMLRPSSSLTSALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDRAYTHINLDEMSVHQALQLGQDSFHPFELRSQRCQMCLRSDSLHKVMERLANPGVRRLIIVEAGSKRVEGIVSLSDIFKFFLG 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01216 490 Pfam CBS domain 357 402 IPR000644 -
Bach5g01216 490 Pfam CBS domain 443 489 IPR000644 -
Bach5g01216 490 SUPERFAMILY CBS-domain pair 356 489 IPR046342 -
Bach5g01216 490 Gene3D Immunoglobulins 18 101 IPR013783 -
Bach5g01216 490 CDD E_set_AMPKbeta_like_N 22 100 - -
Bach5g01216 490 Pfam Glycogen recognition site of AMP-activated protein kinase 21 101 IPR032640 -
Bach5g01216 490 FunFam Sucrose nonfermenting 4-like protein 18 103 - -
Bach5g01216 490 ProSiteProfiles CBS domain profile. 355 411 IPR000644 -
Bach5g01216 490 SMART cbs_1 176 225 IPR000644 -
Bach5g01216 490 SMART cbs_1 358 406 IPR000644 -
Bach5g01216 490 SMART cbs_1 440 489 IPR000644 -
Bach5g01216 490 Gene3D - 147 331 IPR046342 -
Bach5g01216 490 SUPERFAMILY E set domains 21 102 IPR014756 -
Bach5g01216 490 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 152 488 - -
Bach5g01216 490 ProSiteProfiles CBS domain profile. 170 232 IPR000644 -
Bach5g01216 490 SUPERFAMILY CBS-domain pair 156 327 IPR046342 -
Bach5g01216 490 Gene3D - 346 490 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01216 Bach-Chr5 8809677 8815395 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01216 11 111 Protein tyrosine phosphatase (PTP) family AT3G01510 32.692 8.72e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01216 - - gmx:100785692 894.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g01216 5 8809677 8815395 Bach5g01216 5 8809677 8815395 ECH