Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01172 ATGGGTGACACTCCTCCTCGCAGGGAAACCCATCTTCATGATGATACATACGAAGGAAAGAGCTATGCCCTTAGCGGCAAGATAATGCTAAGTGCGATTGTCATTTTGTTCTTCGTTGTCCTTCTAATGGTCTGCCTCCACCTCTATGCGCGCTGGTACCTTTCGCGCGCTCGCCGCCGCCATCACCGCCGTAACCGTAACCGTAACCACCGCCGTTCCCAGCTTGTGTTCTATGTGGACCACGCCATCCCCGGAGCCACCACTGTTGCCTCCCGTGGTCTCGAGGATTCTGTAATTAAGTCTCTCCCTGTTTTTGCGTACTCCTCCAAGACCCACCTGGAACCCGTGGAATGTGCCGTTTGCTTATCGGAATTTGAAGATGGCGAGATGGGTCGGGTTTTGCCCAAATGTAAACATAACTTTCATATCGACTGTATCGATATGTGGTTTCTTTCCCACTCTACGTGCCCGCTTTGCAGGGCTTCCGTTGAAGCACCTGCGTCGATGGACGAAGTGGTTATCACTGTGAGTGAACCGGGTTCGGGTTCGAGTACTGGGTTCTGTGCGGAGTGTGAAAACGAAGGCGAGGAAAGGGACCGGAACGGCCCGACAGTTTCTTCGTCTTCTTCTTCTGTCGGGACCAGGCGGAAGCCATCATTGGCCGGTGTGACCATTGAGGTGCCCTGCCCCGGTAGGAACGAGAGCCTCGAGGAGTCAAATTGCGACTCGCCGTCGACTCAATCGCCGTTTCGGTCACCCATGAGTCGTATGCTTTCGTTTAAGAGAATGCTTAGCAGAGATCGAAAAGCAGGACTATCTCCTTCCTCAGCTTGCAATGGGGATTGTAGCTCCCTGACCAACACCGACATAGAAATGGCGCGAGGAGGGCGAGACGAGGCTCAGTGA 906 0.5375 MGDTPPRRETHLHDDTYEGKSYALSGKIMLSAIVILFFVVLLMVCLHLYARWYLSRARRRHHRRNRNRNHRRSQLVFYVDHAIPGATTVASRGLEDSVIKSLPVFAYSSKTHLEPVECAVCLSEFEDGEMGRVLPKCKHNFHIDCIDMWFLSHSTCPLCRASVEAPASMDEVVITVSEPGSGSSTGFCAECENEGEERDRNGPTVSSSSSSVGTRRKPSLAGVTIEVPCPGRNESLEESNCDSPSTQSPFRSPMSRMLSFKRMLSRDRKAGLSPSSACNGDCSSLTNTDIEMARGGRDEAQ 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01172 301 SUPERFAMILY RING/U-box 98 166 - -
Bach5g01172 301 MobiDBLite consensus disorder prediction 177 301 - -
Bach5g01172 301 Pfam Ring finger domain 117 160 IPR001841 -
Bach5g01172 301 SMART ring_2 118 159 IPR001841 -
Bach5g01172 301 FunFam RING-H2 finger protein ATL3 86 165 - -
Bach5g01172 301 ProSiteProfiles Zinc finger RING-type profile. 118 160 IPR001841 -
Bach5g01172 301 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 81 167 IPR013083 -
Bach5g01172 301 MobiDBLite consensus disorder prediction 276 290 - -
Bach5g01172 301 MobiDBLite consensus disorder prediction 202 217 - -
Bach5g01172 301 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 15 165 IPR044675 -
Bach5g01172 301 MobiDBLite consensus disorder prediction 236 254 - -
Bach5g01172 301 CDD RING-H2_EL5-like 117 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01172 Bach-Chr5 8496104 8497009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01172 13 298 Rapid Response to Elicitors AT3G16720 50.323 3.33e-76 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01172 - - pcin:129320593 302.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g01172 5 8496104 8497009 Bach5g01172 5 8496104 8497009 ECH