Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01170 ATGGCTGATCACGAGAAGAAGAAGAAGGTCGCCATTATTGGTCTCTCCTCTATCCTTCTTGTGGCCATGGTCGCCGCCGTCGCGGTGGGTCTAAACCACGAAGGCGAACTGGAAGAGGACGGCGGCGGCCACCAGATTGCATCATCTCAGAAGAATAAAGTAGATGTGCTTTGCCAGTCAACAGAATACAAAGAAACATGCAAGGAAAGCCTTTCCAAGGTAGGGAATGGAACCACAGACATAAAAGGGCTTTTCAAAGCAGGGTTCAACGCCACCGCCGTGGAAATCCAGAAGCACATTAGGAACTCCACCCTCTTCCATGAGCTCGGCAAGGATAACAGGACCAAACAAGCCTTGGAAGTCTGCAAGGAAGTGCTGGGTTTCGCCATCCGCAACTTACATGACTCCATTGACAAGTTGGACAAATTTGATTTCAACAAGCTCAACGATTACGCCTATGATCTCAAGATTTGGCTTAGTGCAACCATGACCCACCAGCAGACTTGCTTGGACGCCTTCGAGAACACAACCACCGATGCAGGGAAGAAGATGACCAAGGTGTTGAACAGCTCCATGGAGCTGAGCAGCAATGCACTGGACATGGTTGTTGGGTTCTCTAATCTGCTTAAAACCATGAAGTTTGGGTCCAGCGGCAGGAAGCTGCTGTCGGCGGCGGAGGAAACACAAATGGTGGACGGTTTCCCTTCATGGGTGAGTGAAGGACACCGAAGACTGCTTCAGCTGCCTACCGGAGAAAGCATTAAACCCCATATAACAGTGGCCCAAGATGGGACTGGGGACTTCAAAACGCTCACTGATGCCCTTAAGACTGTCCCCCAGAATAACCAAGCCCCATATGTGATATACGTGAAGGCTGGCATATACAAGGAGACCGTGGACGTAATGGGACACATGACCTACGTGACCATCATCGGAGATGGTCCCACCGTGACCAGGTTCACCGGCAACAAGAACTTCAAGGATGGCCTCACAACATACTTCACCTCAACCTTTGGGGTCAACGGCAATTACTTCACCGCCAAGAATATTGGGTTCGAGAACAGCGCAGGGGCAGAGAATTACCAAGCAGTGGCACTCCGGGTAACCTCCGACAAGGCTGTGTTCTACAACTGCCACATGGACGGCTACCAAGACACTTTGTACGCCCAATCCCAGAGACAGTTCTACCGTGACTGCATCATCACCGGCACCATCGACTTTGTCTTCGGCGACGCGGCTGCGGTTTTCCAGAACTGCAAGCTCATCGTGAGGAAACCGCTGGATAACCAGAACTGCATTGTGGCAGCCGGAGGGAGGATGAAGCCTGAAGACCCTAATGCCCTTGTGTTCCAGAGCTGCCAGTTCACTGCTGACCCAGAGTACTTGTCCTCGAGGGTTGGCAGCAAAAGGAGCTCGTATTTGGCAAGACCATGGAGGCCATATGCAAAGACTGTCATCATGGATTCAAAGATTGATGGGTTTTTTGATCCAAAGGGTTATATGGATTGGGAGGGCGAATCATTCCTACAAACTTGCAGTGCACTTGAGTTCCACAACAAGGGAGCTGGTGCTGATACCAGCAACAGAGTGACATGGCCAGGTGTGAAGGAGCTCTCTAAATCAGAAGCTTCAAGTTACTATCCCTACAAGTTCTATGAAATGAAGGATGCAAGTGACACAGATACATTCATAGCTGCCGCCGGGGTACCCTACACTGCTGGCAAGATAAAGGCCAAACGTAATGCGAAAGCCGCCCATTCAGTTTAA 1767 0.5059 MADHEKKKKVAIIGLSSILLVAMVAAVAVGLNHEGELEEDGGGHQIASSQKNKVDVLCQSTEYKETCKESLSKVGNGTTDIKGLFKAGFNATAVEIQKHIRNSTLFHELGKDNRTKQALEVCKEVLGFAIRNLHDSIDKLDKFDFNKLNDYAYDLKIWLSATMTHQQTCLDAFENTTTDAGKKMTKVLNSSMELSSNALDMVVGFSNLLKTMKFGSSGRKLLSAAEETQMVDGFPSWVSEGHRRLLQLPTGESIKPHITVAQDGTGDFKTLTDALKTVPQNNQAPYVIYVKAGIYKETVDVMGHMTYVTIIGDGPTVTRFTGNKNFKDGLTTYFTSTFGVNGNYFTAKNIGFENSAGAENYQAVALRVTSDKAVFYNCHMDGYQDTLYAQSQRQFYRDCIITGTIDFVFGDAAAVFQNCKLIVRKPLDNQNCIVAAGGRMKPEDPNALVFQSCQFTADPEYLSSRVGSKRSSYLARPWRPYAKTVIMDSKIDGFFDPKGYMDWEGESFLQTCSALEFHNKGAGADTSNRVTWPGVKELSKSEASSYYPYKFYEMKDASDTDTFIAAAGVPYTAGKIKAKRNAKAAHSV 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01170 588 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 53 202 IPR035513 -
Bach5g01170 588 FunFam Pectinesterase 4 254 575 - -
Bach5g01170 588 PANTHER PECTINESTERASE 17 552 - -
Bach5g01170 588 Pfam Plant invertase/pectin methylesterase inhibitor 54 201 IPR006501 GO:0004857
Bach5g01170 588 SUPERFAMILY Pectin lyase-like 255 552 IPR011050 -
Bach5g01170 588 Gene3D Invertase/pectin methylesterase inhibitor family protein 48 205 IPR035513 -
Bach5g01170 588 NCBIfam pectinesterase inhibitor domain 49 200 IPR006501 GO:0004857
Bach5g01170 588 Gene3D - 251 574 IPR012334 -
Bach5g01170 588 ProSitePatterns Pectinesterase signature 2. 401 410 IPR033131 -
Bach5g01170 588 CDD PMEI-like_3 57 202 - -
Bach5g01170 588 FunFam Pectinesterase 50 206 - -
Bach5g01170 588 ProSitePatterns Pectinesterase signature 1. 282 301 IPR018040 -
Bach5g01170 588 SMART PMEI_2 49 201 IPR006501 GO:0004857
Bach5g01170 588 Pfam Pectinesterase 257 552 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01170 Bach-Chr5 8483289 8485055 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01170 3 574 Carbohydrate Esterase AT3G05610 44.425 4.97e-180 522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01170 K01051 - gmx:100820068 680.248