Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01169 ATGTCAGCAAACCATGGCATTGATAGGCAAGATCGCAAGAAGAGGTATACCATTCTTGGCCTCACTTCCATCCTTCTAGTGGCAATGGTAGCTGTTATCGCCATTTGTGTAAACAACAAAGACTACAATAAAGCAGATGGCAATGAAAGTGCAGGTGACAGCCAGATCTCAAGCTCCCAAATGAACGTTGAGATGCTTTGCCAACCAACAATTTACAAAGAAACCTGTAAGAATACCCTCTCTAAGGCCGCTAATGAAACCTCTGAGCCCAAAGAACTCATGAAAACTGGGTTTAATGCTACCATCAAGGAGCTCGAAAACATCATAAACAATTCCACCCTCTACGAAGAACTTGCCAAGGACAACATGACCAGACAAGCCATGGATATTTGCAAGGAAGTCATGGACTTTGCTGTGGACAACTTTCACCAATCTATTGACAAGTTGTCTGCTTTTGAATTGAGCAAGCTTAATGAGTATGCTTATGATCTCAAGGTTTGGCTTGGAGCCACAATCACACACCAACAAACATGTTTGGACGGGTTTGAGAAGACAAACACACAAGCTGGGGAGAAAATGGCCAAGGCATTGAATGCATCCATGGAGATGAGTAGTAATGCTCTTGCTATGGTTACTGGGTTCTCTGATACGCTCAAAAATCTCCACTTGAACTTTAACAGGAAGCTTCTTTCCCAAGAGGGAGATGGTTTCCCTTCATGGGTTAGTGAAGGGCAGAGAAGGCTCCTTCAGGTTGGTACAGATGGGGTTAAGCCTAATGTGGTTGTGGCTCAAGATGGGAGTGGCAATTTCAGGACACTCACTGAGGCCCTTAAGACTGTCCCAAAAAAGAATGCTGTTCCCTATGTGATCTACGTCAAGGCTGGTTTGTATAAGGAGATAGTGAGAGTGGATAAAACCATGACCCATGTCACAATTATTGGAGATGGCCCCACAAAGACCAGGTTCACTGGTAGCCTCAACTATGTAGATGGTCAGCAAACTTACTTCACTGCAACCTTCGGTAAGCATGTTGTACTCCTTATGATTTCATTTCCAACCTAA 1062 0.4388 MSANHGIDRQDRKKRYTILGLTSILLVAMVAVIAICVNNKDYNKADGNESAGDSQISSSQMNVEMLCQPTIYKETCKNTLSKAANETSEPKELMKTGFNATIKELENIINNSTLYEELAKDNMTRQAMDICKEVMDFAVDNFHQSIDKLSAFELSKLNEYAYDLKVWLGATITHQQTCLDGFEKTNTQAGEKMAKALNASMEMSSNALAMVTGFSDTLKNLHLNFNRKLLSQEGDGFPSWVSEGQRRLLQVGTDGVKPNVVVAQDGSGNFRTLTEALKTVPKKNAVPYVIYVKAGLYKEIVRVDKTMTHVTIIGDGPTKTRFTGSLNYVDGQQTYFTATFGKHVVLLMISFPT 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01169 353 Gene3D - 253 345 IPR012334 -
Bach5g01169 353 Pfam Pectinesterase 259 342 IPR000070 GO:0030599|GO:0042545
Bach5g01169 353 NCBIfam pectinesterase inhibitor domain 59 212 IPR006501 GO:0004857
Bach5g01169 353 FunFam Pectinesterase 59 215 - -
Bach5g01169 353 CDD PMEI-like_3 66 215 - -
Bach5g01169 353 SMART PMEI_2 58 210 IPR006501 GO:0004857
Bach5g01169 353 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 63 214 IPR035513 -
Bach5g01169 353 Gene3D Invertase/pectin methylesterase inhibitor family protein 58 214 IPR035513 -
Bach5g01169 353 SUPERFAMILY Pectin lyase-like 256 340 IPR011050 -
Bach5g01169 353 Pfam Plant invertase/pectin methylesterase inhibitor 63 210 IPR006501 GO:0004857
Bach5g01169 353 PANTHER PECTINESTERASE 25 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01169 Bach-Chr5 8480507 8481568 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01169 8 339 Carbohydrate Esterase AT3G05610 43.750 8.96e-96 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01169 K01051 - gmx:100784682 389.808