Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01163 ATGTTCTTTTGCTCCAATTTTGAATCACTGCAGGCACCCACCATGTCGCCAAGTTTTAATACAGTACTGGATTATTCTCTTGATCAACACCACCACCAACACCAGCAGCTCATGAAGTTTCAAATGGGAGAAACTTCAGGCGAAAGCAGTAGCGAGATGGTGGATTACATGCTGCATAATCCTCATCAACAGCAACAACAAGAACAAATATCTGCTGGGTTCTATGGTACGGGCACTACTTGTTTCGATAAATTGAGCTTTACAGATGTGATGCAGTTTGCAGATTTTGGACCCAAGTTGGGCTTAAACAACACCAAGACTACTGCTGAAGAAGAACCAGGCATCGATCCGGTCTATTTCCTCAAGTTTCCGGTGTTAAACGATAAAATGGAGGATCAGAATCTCATGGTTAGCTCACAAGCTGGTTGTGGAGAAGCAGAAAATGATGAGAGGTTAAAAGGGATGAGCGTAGAAGATAAATCAGCAATTGGAGGAGGAGGAGTGAGAGATCATCTGGATGAAGAAGCTTTGGTTTCGGATAATAATAACTCGGTGGAGCTTCGTTTTCTTGGTGAGGAACTCCAGAAGAACCCTATACAGGAAAACAAGAACAAAAGGAAAAGGCCTAGAACAAGCAAGACAAGCGAGGAAGTTGAGAGTCAGCGTGTGATTCATATAGCAGTTGAAAGGAACAGAAGGAAGCAAATGAACGAGCATCTTCGTGTCTTGAGATCACTCATGCCGGGTTCATACGTCCAGAGGGGGGATCAAGCTTCAATAATTGGAGGAGCCATAGAATTTGTGAGAGAATTAGAGCAACTTCTTCAGTGCTTGGAATCACAGAAGACGAGGAGACTACTTGGAGAAGCAGGTCATTCAAGAGCACAGATGGGGGATTCCTCATCACTTCAAATACAGCAGCCTCTACAGCCTCCATTCTTTCCGTCCATGCCTTTACCAAACGACAACATGATTGAGACTGGACTTGGCGAAGAGACCGCAGAGAACAAGTCATGTTTGGCTGATATAGAAGTGAAGCTTCTAGGATTTGATGCCATGATCAAAATTCTATCAAGAAGAAGGCCAGGGCAGTTGATCAAAATCATTGCTGCCCTTGAGGATCTCCAGCTTATTATCCTTCACACCAATATCACTACCATTGAACAATCAGTCCTTTATTCATTCAACGTCAAGGTGTCAAGTGATTCAAGGTTCACAGCAGAAGATATAGCAAGCTCTGTTCAACAGATATTTAGTTTTATCCATGCAAACACTGGCATGTGA 1284 0.4322 MFFCSNFESLQAPTMSPSFNTVLDYSLDQHHHQHQQLMKFQMGETSGESSSEMVDYMLHNPHQQQQQEQISAGFYGTGTTCFDKLSFTDVMQFADFGPKLGLNNTKTTAEEEPGIDPVYFLKFPVLNDKMEDQNLMVSSQAGCGEAENDERLKGMSVEDKSAIGGGGVRDHLDEEALVSDNNNSVELRFLGEELQKNPIQENKNKRKRPRTSKTSEEVESQRVIHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKTRRLLGEAGHSRAQMGDSSSLQIQQPLQPPFFPSMPLPNDNMIETGLGEETAENKSCLADIEVKLLGFDAMIKILSRRRPGQLIKIIAALEDLQLIILHTNITTIEQSVLYSFNVKVSSDSRFTAEDIASSVQQIFSFIHANTGM 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01163 427 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 220 271 IPR011598 GO:0046983
Bach5g01163 427 FunFam Basic helix-loop-helix transcription factor 211 286 - -
Bach5g01163 427 CDD bHLH_AtFAMA_like 225 291 - -
Bach5g01163 427 Pfam Helix-loop-helix DNA-binding domain 221 272 IPR011598 GO:0046983
Bach5g01163 427 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 220 286 IPR036638 GO:0046983
Bach5g01163 427 PANTHER TRANSCRIPTION FACTOR FAMA 53 418 IPR044283 GO:0003700|GO:0010052
Bach5g01163 427 SMART finulus 226 277 IPR011598 GO:0046983
Bach5g01163 427 MobiDBLite consensus disorder prediction 198 219 - -
Bach5g01163 427 Gene3D - 218 290 IPR036638 GO:0046983
Bach5g01163 427 CDD ACT_UUR-ACR-like 353 417 - -
Bach5g01163 427 MobiDBLite consensus disorder prediction 196 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01163 Bach-Chr5 8413397 8415140 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01163 42 427 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G24140 60.584 5.64e-147 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach5g01163 HLH 1.1e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01163 K26213 - qsu:112039857 488.419