Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01154 ATGGCAGGTGTATCTCTCAAGTGCGGGGATTGTGGAGCGCTATTGAAATCTGTAGAAGAAGCTGAGGAGCACGCCAAGCTCACCTCTCACTCTAACTTCTCCGAATCTACTGTAGCAGTTCTTAACCTTGTTTGCACCACTTGTGGCAAGCCATGCCGATCAAAAACCGAGAGTGATTTGCATACAAAAAGAACTGGACATACTGACTTCGTTGATAAGACTTCCGAGGCAGCTAAACCAATAAGTTTAGAGGTTCCAAAGGGGGAGGCAGCATCAAAAGAGGCCGGGGATGCACCTACTGACCAGAATGAAGAAATGGTTGTTCCGGAGGTTGACAAAAATCTGCTTGGGGAACTTGAGTCCATGGGTTTTCCTACAGCTCGAGCAACACGGGCACTTCATTATTCTGGAAATGCTAGTGTTGAAGCGGCTGTAAATTGGGTAGTTGAACATGAGAATGACCCTGACATAGATGAGATGCCCTTGGTACCTGCCAACTCTAAAGTTGAGGCTCCTAAACCTTCTCTCACACCAGAACAAATAAAGGCCAAACAACAGGAGCTAAGGGAGAAGGCTCGGAAGAAGAAAGAAGAGGAAGATAGGAGGGTGGAAAGAGAAAAAGAAAAGGAGAGAATTCGTGTGGGCAAGGAGTTGTTAGAAGCAAAGAGGATCGAGGAAGAGAATGAGAGAAAAAGGTTGCTGGCTTTGCGAAAAGCAGAGAAAGAGGAAGAGCAAAAGGCCAGAGAGAAAATTAGGCAGAAATTGGAAGAAGATAAGGCCGAAAGAAGGAGAAGACTTGGATTGCCTCCAGAAGAACCTTCAACTGCCAAACCTTCAACTGCTGTGGAGGAGAAAAAGAGTTTTTTGCCTGTTAGGCCTGCCACAAAAGCTGAGCAAATGAGAGAATGCTTGCGTTCTCTCAAGCAGAATCACAAGGATGATGATGCTAGAGTAAAAAGAGCATTTCAGACTCTTCTTACTTATGTGGGGAATGTCGCCAGAACTCCTGACGAGGAAAAATTCAGAAAAATTAGACTTGCTAACCAAACTTTCCAGGAAAGAGTTGGTTCATTGAACGGGGGCATTCAGTTCCTGGAGATCTGCGGGTTTGAGAAAATTGATGGTGGTGAGTTTCTGTTTTTGCCTAGGGACAAGGTTGACATGGCAGTCCTGAATTCAGCTGGTTCTGAACTGGATTCTGCAATAAAAAATCCCTTCTTTGGAGTTCTTTAGTTATTGTAATGTGTTATTAGAGGCTTGAGGATTGTAGTTTGCATGAATCAATGTCAAGAACTGCCATTTGTT 1305 0.4437 MAGVSLKCGDCGALLKSVEEAEEHAKLTSHSNFSESTVAVLNLVCTTCGKPCRSKTESDLHTKRTGHTDFVDKTSEAAKPISLEVPKGEAASKEAGDAPTDQNEEMVVPEVDKNLLGELESMGFPTARATRALHYSGNASVEAAVNWVVEHENDPDIDEMPLVPANSKVEAPKPSLTPEQIKAKQQELREKARKKKEEEDRRVEREKEKERIRVGKELLEAKRIEEENERKRLLALRKAEKEEEQKAREKIRQKLEEDKAERRRRLGLPPEEPSTAKPSTAVEEKKSFLPVRPATKAEQMRECLRSLKQNHKDDDARVKRAFQTLLTYVGNVARTPDEEKFRKIRLANQTFQERVGSLNGGIQFLEICGFEKIDGGEFLFLPRDKVDMAVLNSAGSELDSAIKNPFFGVL 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01154 410 CDD PUB_UBA_plant 304 410 - -
Bach5g01154 410 SMART PGNneu 320 383 - -
Bach5g01154 410 Coils Coil 181 213 - -
Bach5g01154 410 MobiDBLite consensus disorder prediction 239 295 - -
Bach5g01154 410 MobiDBLite consensus disorder prediction 183 210 - -
Bach5g01154 410 ProSitePatterns Zinc finger C2H2 type domain signature. 8 30 IPR013087 -
Bach5g01154 410 PANTHER F13M7.16 PROTEIN 1 410 - -
Bach5g01154 410 SUPERFAMILY PUG domain-like 292 406 IPR036339 -
Bach5g01154 410 Coils Coil 216 261 - -
Bach5g01154 410 CDD UDM1_RNF168_RNF169-like 223 265 - -
Bach5g01154 410 MobiDBLite consensus disorder prediction 167 210 - -
Bach5g01154 410 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 110 151 IPR015940 -
Bach5g01154 410 Gene3D - 112 158 - -
Bach5g01154 410 Pfam UBA/TS-N domain 117 147 IPR015940 -
Bach5g01154 410 SUPERFAMILY UBA-like 96 164 IPR009060 GO:0005515
Bach5g01154 410 CDD UBA_PUB_plant 110 158 - -
Bach5g01154 410 MobiDBLite consensus disorder prediction 239 270 - -
Bach5g01154 410 ProSitePatterns Zinc finger C2H2 type domain signature. 45 67 IPR013087 -
Bach5g01154 410 Pfam PUB domain 317 387 IPR018997 -
Bach5g01154 410 Gene3D - 297 400 - -
Bach5g01154 410 MobiDBLite consensus disorder prediction 74 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01154 Bach-Chr5 8348711 8355643 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01154 104 410 C2H2 Transcription Factor Family AT1G04850 80.000 2.19e-154 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01154 K24348 - jre:109003439 619.387