Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01131 ATGAGGGGAAGGAGTTATACTCCATCACCACCACGAGGGTATGGCAAAAGAGGAAGGAGCCCAAGTCCTAGGGGCCGTTACGGTGGCCGTGGACGAGATCTCCCCACTAGCCTTCTAGTTCGCAACCTTCGCCATGACTGTAGGCCTGAGGATCTTCGTAGACCATTTGGGCAGTTCGGTCCTCTTAAGGACATTTACCTGCCAAAGGATTATCACACTAGAGAGCCCCGTGGTTTTGGTTTTGTCCAGTATGTGGATCCTGCTGATGCTGCTGAGGCTAAATATCATATGGATGGTCAAATTCTTCTTGGTCGAGAGTTGACTGTTGTATTTGCTGAGGAGAATAGGAAGAAACCAGTTGAGATGAGACACAGAGAACGAAGGGGCAGTCGATCTCATGATCGAAGAAGATCTCCTCCCCGTTATTCTCGTTCGCCTCAGTACTCCCGATCACCACCACGTCATGGATCTCGGTCTCGAAGTGGTGATCACCATTCCCCTCTTCCTAAGCGAAGGGAATACTCAAGATCCCCCTCACCTGAAGATAGGAGGTACAGTGGAGAAAAATCATATTCACGACACAGTAGGGAGAGGTCATTCTCGCGCTCCCCACCGCCATATAATGGTGGCTCAAGGAGCCGTAGTCAGAGTCCAACTAAGGTTCCAGCCCGGAGCAGTAGTCAGAGTCCACATCGTGATGATTATCCAAGGGAACCTGCCCGTGCTAGGTCTCCCAGTCAATGAATGAAATACTTGGAAGGAGACTTTTGTGTTTAGAACATGTTGGATTTTATTAAAACATTCTACAATGGGCTTTTGTTGTACCTTTGAACAAAAATCCGTGTTATTTGCTGTTAAAGTCGAACTCTGTAGGGGGAAGTTTTGTTCAAAATCTTCTCATGTGGAATTTCGAATTGTCCTGGAATGCGGTCATC 935 0.4781 MRGRSYTPSPPRGYGKRGRSPSPRGRYGGRGRDLPTSLLVRNLRHDCRPEDLRRPFGQFGPLKDIYLPKDYHTREPRGFGFVQYVDPADAAEAKYHMDGQILLGRELTVVFAEENRKKPVEMRHRERRGSRSHDRRRSPPRYSRSPQYSRSPPRHGSRSRSGDHHSPLPKRREYSRSPSPEDRRYSGEKSYSRHSRERSFSRSPPPYNGGSRSRSQSPTKVPARSSSQSPHRDDYPREPARARSPSQ 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01131 247 MobiDBLite consensus disorder prediction 201 229 - -
Bach5g01131 247 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 36 114 IPR000504 GO:0003723
Bach5g01131 247 Gene3D - 31 146 IPR012677 -
Bach5g01131 247 SMART rrm1_1 37 110 IPR000504 GO:0003723
Bach5g01131 247 SUPERFAMILY RNA-binding domain, RBD 36 141 IPR035979 GO:0003676
Bach5g01131 247 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 35 232 - -
Bach5g01131 247 MobiDBLite consensus disorder prediction 1 34 - -
Bach5g01131 247 MobiDBLite consensus disorder prediction 118 247 - -
Bach5g01131 247 MobiDBLite consensus disorder prediction 156 200 - -
Bach5g01131 247 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 38 107 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01131 Bach-Chr5 8155190 8157672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01131 36 145 Eukaryotic Initiation Factors Gene Family AT4G34110 27.928 2.40e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01131 K12900 - qsa:O6P43_003831 295.819