Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01116 ATGAGGAACCCGTCATCAGCTGGAGGAGCAAGAGCAGGAGGAACGACGTCGTCTGGTGGTGGTGGTGGTAGTAACAGTAACAATAACACAAAAAATAGCAGTAGTAGTGGTAAAACTCCATGCTGTAGCAAAGTTGGTATCAAGAGAGGGCCATGGACTCCTGAAGAAGATGAGCTTTTAGCAAATTACATAAAGAAAGAAGGAGAAGGGCGATGGCGAACTCTCCCAAAGCGTGCTGGCCTCCTCCGCTGCGGCAAGAGCTGCCGTCTCAGGTGGATGAACTACCTCCGCCCCTCCGTCAAGCGAGGCCAGATCGCCCCCGACGAAGAAGATCTCATCCTCCGCCTCCACCGCCTCCTCGGCAACCGGTGGTCCTTGATAGCCGGGCGAATTCCTGGGCGAACTGATAATGAGATAAAGAATTATTGGAACACCCATCTCAGCAAGAAGCTCATAAGCCAAGGGATAGATCCAAGAACCCACAAGCCCCTTAGTCCTAATTCCTCTTCTCCACACCCTCCATATGCAATTCCCAACCATGCTTCTTCTTCATCAAAACCCACTACTCATATTCTTCCAACTTCAACTGCCTCTCCTCCTAAACCAAATCAAATCTCTACTGATGATGATCACGAAACCCCTCCTGCTGTGAACCAAGAAAATGGCTACTTTAATGGGGATCACTATCAAGTGTATGAGAATCTACCAGCAGCTGTGACGGATTCTGATCATGGATCTGCAGTGGGGCTCAGAAGCAACAATATCATTCACAACGAGGATGATGATGATATCAATTACTGTACTGATGATGGGTTCTCTTCTTTCCTCAATTCACTCATCAATGAGGAAGCTTTTGCTGCTCAACACCAACTCCAACAATACCCTTCCAATAATGGGATTCATGCAACAGAGTCTTCTGACCCTTTGATTACAAACATCCACCCATCAAGTTTTGGCTTTGCTACTGCTGGCTGGGAATCGCCCATCACGGCTTCCACTTCTGCTTTTGCACAAAACGATCCCAAAAGGGTTGAAGATAATGTTGAATAG 1050 0.4752 MRNPSSAGGARAGGTTSSGGGGGSNSNNNTKNSSSSGKTPCCSKVGIKRGPWTPEEDELLANYIKKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYLRPSVKRGQIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKLISQGIDPRTHKPLSPNSSSPHPPYAIPNHASSSSKPTTHILPTSTASPPKPNQISTDDDHETPPAVNQENGYFNGDHYQVYENLPAAVTDSDHGSAVGLRSNNIIHNEDDDDINYCTDDGFSSFLNSLINEEAFAAQHQLQQYPSNNGIHATESSDPLITNIHPSSFGFATAGWESPITASTSAFAQNDPKRVEDNVE 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01116 349 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 44 96 IPR017930 -
Bach5g01116 349 FunFam Myb transcription factor 46 102 - -
Bach5g01116 349 Gene3D - 49 101 - -
Bach5g01116 349 MobiDBLite consensus disorder prediction 1 41 - -
Bach5g01116 349 CDD SANT 51 96 IPR001005 -
Bach5g01116 349 FunFam transcription repressor MYB5-like 106 172 - -
Bach5g01116 349 ProSiteProfiles Myb-like domain profile. 44 96 IPR001005 -
Bach5g01116 349 MobiDBLite consensus disorder prediction 156 224 - -
Bach5g01116 349 Pfam Myb-like DNA-binding domain 106 147 IPR001005 -
Bach5g01116 349 Pfam Myb-like DNA-binding domain 49 96 IPR001005 -
Bach5g01116 349 CDD SANT 107 147 IPR001005 -
Bach5g01116 349 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 37 218 - -
Bach5g01116 349 MobiDBLite consensus disorder prediction 1 43 - -
Bach5g01116 349 Gene3D - 106 170 - -
Bach5g01116 349 ProSiteProfiles Myb-like domain profile. 97 147 IPR001005 -
Bach5g01116 349 SUPERFAMILY Homeodomain-like 46 143 IPR009057 -
Bach5g01116 349 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 97 151 IPR017930 -
Bach5g01116 349 SMART sant 48 98 IPR001005 -
Bach5g01116 349 SMART sant 101 149 IPR001005 -
Bach5g01116 349 MobiDBLite consensus disorder prediction 174 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01116 Bach-Chr5 8067930 8069141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01116 31 306 MYB Transcription Factor Family AT3G13540 51.773 2.92e-85 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach5g01116 Myb_DNA-binding 3e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01116 K09422 - cave:132163954 368.622