Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01088 ATGAAATCATCAGAAAACCCTGATGGCTTTCATGATCAATCTGAGAAAAAACCCTGCTCCTCATCTGATCACTCAGGGTCGTTGAGGCTATTTGGATTCTCGTTGACAGACAACAAGAGTTCATACGAGTGCCAATTTTGTAGTCGGAAATTTTCTAAGTCTCAAGCTCTGGGAGGTCATCAGAATGCTCACAAGATGGAACGCCAACAGGCAAAGCTAGCCTATTTGTATCGCCTTCAACTTCAACGGTTCACATCAGCTGATACCCCTAATCTCATTGTGCCACACCGAGCAACAAGCTCGGCAACCATCACTTTTGGCGGCGCATCGCAGCCCCGTTTGTTGTCTCTGCCGGAGCTGTACCCTAATACGCATCGTTTTTGCCCCTGTGGTGGACAACATCCACTTCAAGAAGCATCAGCCGTTGATGAAAATATTGATCTCACCTTGAGACTAGGTCAAGGTAGCTCCTCAGAGAGAGAGGGTTTGGAAACAACGGGAAACTACTAG 510 0.4706 MKSSENPDGFHDQSEKKPCSSSDHSGSLRLFGFSLTDNKSSYECQFCSRKFSKSQALGGHQNAHKMERQQAKLAYLYRLQLQRFTSADTPNLIVPHRATSSATITFGGASQPRLLSLPELYPNTHRFCPCGGQHPLQEASAVDENIDLTLRLGQGSSSEREGLETTGNY 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01088 169 SUPERFAMILY beta-beta-alpha zinc fingers 39 69 IPR036236 -
Bach5g01088 169 Gene3D Classic Zinc Finger 19 90 - -
Bach5g01088 169 ProSiteProfiles Zinc finger C2H2 type domain profile. 42 69 IPR013087 -
Bach5g01088 169 PANTHER ZINC FINGER PROTEIN 5 41 88 IPR044299 GO:0010090
Bach5g01088 169 MobiDBLite consensus disorder prediction 1 19 - -
Bach5g01088 169 ProSitePatterns Zinc finger C2H2 type domain signature. 44 64 IPR013087 -
Bach5g01088 169 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01088 Bach-Chr5 7744122 7744631 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01088 42 91 C2H2 Transcription Factor Family AT1G68360 60.000 1.87e-11 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach5g01088 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01088 - - qsa:O6P43_005548 90.8929