Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01080 ATGGCAAATAACATGATGAGGCCGCTTGTGGGTCCTGAGATACATGGATTCCACACAATGCAAGATCTGGATGTTGAGAACATTATGGAGGAAGCAAAAGGCAGATGGCTTCGTCCCAATGAGATTCATGCCATACTGTGCAATTACAAGTATTTCACCATCAATGTCAAGCCTGTGAAATTGCCCAAAAGTGGCACTATTGTATTATTTGACCGCAAGATGCTTAGGAACTTTCGGAAAGATGGGCACAATTGGAAAAAGAAAAAGGATGGGAAAACTGTTAAAGAAGCTCATGAGCACTTAAAAGTTGGTAATGAAGAAAGGATACATGTATATTATGCACATGGCCAAGATAACCCAAGCTTTGTCCGCAGATGTTATTGGCTTCTTGATAAGAGTCTGGAACACATTGTCCTTGTTCATTATCGTGAAACACAGGAGGTGCAAGGTTCTCCAGTCACGCCTGTCTATTCAACTTCTAGTTCTGCATCTGATCCAACAGCTCCATTGATTCTATCAGAAGAGTTAGATTCTGGGACCAACGATGCATGTGGTAGTGAGCAAAATGACCATCTAACAGTTCAAAGCCTTGAATTGAGACTTCATGAGATTAATACACTTGAATGGGATGATCTGGTGGTTTCTAATGATCTTAACACCTCTATTGCACCTAATGAAGTTTTTGCAGGGAAAGTTCCACTTTATGATCAACAAAATCAAACTTTACTGAATGGCAGTTTGAGTAATGTGGTCAGCAATTCCTTTGTAGAAGTTCCTTCTTTTAGTAGTTTAACTGAGCCAATTGTTGGGAGCAATAGTGCTCCTTACAATTTTCAAGAAAATTCAAATCTTCAGAAATTTGAAAGCCAAGTAAATCCAAATGCGCAGAAGGGACGTCCTATCTCTACATGTGGTATAGATTCCTTGAAAACTTTGGTTAATGATGGTTTGCAAAGTCAGGACAGCTTTGGAAGGTGGGTGAATCACCTCATGTCTGATTCACCATGTTCTGTGGATGAGTTGGCGATTGATTCCTCTGTTACATATATTGACGAACCATGTTCTTCTTTGGTTGTGGATCATCAGCAACCTTTGCCAGAACAAGTATTTAATGTCACTGATGTGTCACCTGGATGGGCATCTTCCACTGAGAAGACCAAGGTCCTGGTCACAGGGATTTTTCATGATGACTATCTACACCTTGCAAAGTCCAATCTATTGTGTGTATGTGGTGATGTAATTGTTCCTGCAGAAATAGTTCAGGTTGGGGTCTACCGATGTTGGGCACCGCCACATTCCCCTGGGTTTGTGAATCTCTATCTGAGCTTGGATGGCCATAAGCCCATTAGCCAAGTTGTTAATTTCGAGTATCGCACTCCTGTTTTGCATGACCCAACAGCTTATTTAGAGAAGTACAATTGGGAAGAGTTTCGACTTCAGATCAGGCTTGCTAATTTGCTCTTTTCTACCCAAAAGAGCCTTGACATTTTCTCTAGTAAAGTATCATCTAATGCACTCAAGGCAGCCGAGCAATTTGCCTTCAAAACCTCATATTTTTCCAAAAGTTGGGAACTCTTGATCAAATCAATTGAAGACAACAAAACTCCATTTCCACATGCAAAAGATGTCTTGTTTGAAATTGCATTGAAAAACAGACTAAAGGAATGGTTGTTGGAAAGGATTATCTTAAGCTCTAAGTCTACTGAATATGATGCTCAAGGTCAAGGTGTAATCCATTTGTGCACGATTTTGGGATATTCTTGGGCTGTTTCCTTATTTTCATGGTCAGGCTTGTCACTGGATTTTCGTGATAAATTTGGATGGACAGCTCTTCATTGGGCAGCACATTGTGGAAGCGAGAAAATGGTTGCAACTTTGTTGTCTGCTGGGGCGAGGCCAAACTTGGTCGCAGATCCTACTCCTGAAAATCCTGGTGGTTGTACTCCCGCTGATTTGGCTTATATGAATGGTTATGATGGCTTAGCAGCATATCTTTCAGAAAAGGCTCTGGTTGAGCAGTTCAATGACATGAGCTTAGCTGGAAATATCAGTGGCTCACTAGAACCTAGTTCAACTGATCCCATAAATTCTGAAAATCTCACTGAGGATGAGGTGTATCTGAAGGAAACGTTGGCAGCTTATCAGACAACCGCTGAGGCAGCGGCACGCATACAAGCTGCATTTAGGGAGCGCTCTCTAAAATTACGAACTACAGCAGTTCGGTTTAGCAATCCTGAGGCTGAAGCTCGGAGAATAGTTGCAGCGATGAAGATTCAACATGCCTTCCGCAACTTTGAGAACAAGAAGAAGATGGCTGCTGCTGGTCGTATTCAGCATACCTTCCGTACATGGAAGATCCGTAAAGAATTTCTCCACATGCGTCGTCAGGTTATCAAAATTCAGGCTGCTTTCAGGGGTTACCAAGTGAGGAGGGAATATCGTAAAATTCTTTGGTCAGTTGGAGTGCTTGAGAAAGTAATCCTGCGTTGGCGTTTGAAGAGAAGAGGGTTCCGTGGGCTACAAGTTAATCCTGTTACACAAATGGAAGATCAAAGACAGGAAAGTGATACAGAGGAGGACTTCTTCCAGACCAGCAGGAAGCAAGCTGAAGAACGTGTTGAGAGATCTGTGGTGCGTGTTCAGTCGATGTTCCGTTCCAAGAAAGCTCAAGAAGAGTATAGGAGGATGAAGCTGACCCATAAACAAGTAAAGATGGAATATGAAGAGTTTCTAAATCCTGCTACTGAGATGGAACAGTGATAGGTCCCAAATTTAGAAGAAAAGCTTCCATAAATATAGCCTCGACATTATAACATCATGTACCAGACGAGTATTATCAAGGGACTTTATGACTTTTTTTTTTCTCATAATGTAAAGTAAAGTAGATCGTGTAAATTTGAAGCCTAGGCTATAACGGTATAATTTAGGTGAGTGAGCTGTGCGTAGGGTTTTTTTCAATACATTGTAAAATCTGGCTTTGTATGGCATGCATGTAAAAAAAGCT 3004 0.4138 MANNMMRPLVGPEIHGFHTMQDLDVENIMEEAKGRWLRPNEIHAILCNYKYFTINVKPVKLPKSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGQDNPSFVRRCYWLLDKSLEHIVLVHYRETQEVQGSPVTPVYSTSSSASDPTAPLILSEELDSGTNDACGSEQNDHLTVQSLELRLHEINTLEWDDLVVSNDLNTSIAPNEVFAGKVPLYDQQNQTLLNGSLSNVVSNSFVEVPSFSSLTEPIVGSNSAPYNFQENSNLQKFESQVNPNAQKGRPISTCGIDSLKTLVNDGLQSQDSFGRWVNHLMSDSPCSVDELAIDSSVTYIDEPCSSLVVDHQQPLPEQVFNVTDVSPGWASSTEKTKVLVTGIFHDDYLHLAKSNLLCVCGDVIVPAEIVQVGVYRCWAPPHSPGFVNLYLSLDGHKPISQVVNFEYRTPVLHDPTAYLEKYNWEEFRLQIRLANLLFSTQKSLDIFSSKVSSNALKAAEQFAFKTSYFSKSWELLIKSIEDNKTPFPHAKDVLFEIALKNRLKEWLLERIILSSKSTEYDAQGQGVIHLCTILGYSWAVSLFSWSGLSLDFRDKFGWTALHWAAHCGSEKMVATLLSAGARPNLVADPTPENPGGCTPADLAYMNGYDGLAAYLSEKALVEQFNDMSLAGNISGSLEPSSTDPINSENLTEDEVYLKETLAAYQTTAEAAARIQAAFRERSLKLRTTAVRFSNPEAEARRIVAAMKIQHAFRNFENKKKMAAAGRIQHTFRTWKIRKEFLHMRRQVIKIQAAFRGYQVRREYRKILWSVGVLEKVILRWRLKRRGFRGLQVNPVTQMEDQRQESDTEEDFFQTSRKQAEERVERSVVRVQSMFRSKKAQEEYRRMKLTHKQVKMEYEEFLNPATEMEQ 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01080 919 FunFam calmodulin-binding transcription activator 5 536 676 - -
Bach5g01080 919 SMART ANK_2a 606 635 IPR002110 GO:0005515
Bach5g01080 919 SMART ANK_2a 645 676 IPR002110 GO:0005515
Bach5g01080 919 FunFam Calmodulin-binding transcription activator 5 366 462 - -
Bach5g01080 919 Pfam IQ calmodulin-binding motif 795 814 IPR000048 GO:0005515
Bach5g01080 919 SUPERFAMILY E set domains 371 458 IPR014756 -
Bach5g01080 919 Gene3D Immunoglobulins 366 461 IPR013783 -
Bach5g01080 919 MobiDBLite consensus disorder prediction 847 867 - -
Bach5g01080 919 ProSiteProfiles IQ motif profile. 770 799 IPR000048 GO:0005515
Bach5g01080 919 ProSiteProfiles IQ motif profile. 793 817 IPR000048 GO:0005515
Bach5g01080 919 Pfam Ankyrin repeats (3 copies) 557 635 IPR002110 GO:0005515
Bach5g01080 919 Pfam CG-1 domain 31 144 IPR005559 GO:0003677
Bach5g01080 919 SUPERFAMILY Ankyrin repeat 566 668 IPR036770 -
Bach5g01080 919 Gene3D - 542 676 IPR036770 -
Bach5g01080 919 ProSiteProfiles Ankyrin repeat region circular profile. 606 634 - -
Bach5g01080 919 ProSiteProfiles IQ motif profile. 874 902 IPR000048 GO:0005515
Bach5g01080 919 ProSiteProfiles CG-1 DNA-binding domain profile. 25 151 IPR005559 GO:0003677
Bach5g01080 919 SMART iq_5 769 791 IPR000048 GO:0005515
Bach5g01080 919 SMART iq_5 792 814 IPR000048 GO:0005515
Bach5g01080 919 SMART iq_5 872 894 IPR000048 GO:0005515
Bach5g01080 919 ProSiteProfiles Ankyrin repeat profile. 606 638 IPR002110 GO:0005515
Bach5g01080 919 SMART CG_1_2 28 146 IPR005559 GO:0003677
Bach5g01080 919 Coils Coil 886 906 - -
Bach5g01080 919 Gene3D - 767 817 - -
Bach5g01080 919 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 24 902 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01080 Bach-Chr5 7668747 7676169 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01080 28 907 CAMTA Transcription Factor Family AT3G16940 55.367 0.0 957
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Bach5g01080 CG-1 1.6e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01080 K21596 - gmx:100793970 1333.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g01080 5 7668747 7676169 Bach2g01250 2 21900617 21908181 BWGD
Bach5g01080 5 7668747 7676169 Bach5g01080 5 7668747 7676169 ECH