LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach5g01067	ATGAGATCCAATTCCCACATCTTATTTTCCCTCATTTTCTTATCATACACCATAAACATCATCCATGTTGAAAGCAAGGGAAAATCAGAATCAGATTCTGGTTTTTTCCTCATTTCTTGTGGTTCTTCCAATGGTGGCACCGATTCTGACGGACGAAAATGGGTGTCGGATTCTCATTATCTAAACTCTTCCTCTGAAACAATAAACTCAACAGCCCAAACCCAAGAGCCTTCTTTACCTTCCCAAATACCTTATATGTCTGCAAGAATTTTCACTTCCATATCCACATACCAATTCCCCGTTTCACCAAAGAAGCGCCTTTGGGTTCGTCTCTACTTTTACCCCTCCATTTACTCTAATTTTAGTTCCCCAGATGCCTATTTCGCTGTAGTGGCAAATGGGTTCACTCTTCTCAACAATTTCAGTGCCTCCATCACAGCAAAAGCTCTAACACAAGCCTATTTCATCAAAGAGTTCTCCCTTACCCCCGTTCAGTCAGGTAAACTCAACATCACCTTCATACCCTCTTCACAACACAGTGGATCTTATGCTTTCATCAATGGCATTGAGATAATCCCTATGCCTGATATATTCAAAGAAGCCACTTTGGTTTATGCCACCAGCCAAACTATTGATATTGGAATCTATTCTTTGCAAACCATGTTTAGGTTAAATGTTGGGGGCCAGTATATTGGACCCACCAGTGATTCTGGTCTGAGCAGAATTTGGTATGATGATTCTCCCTATTTGTATGGTGCAGCTTATGGGGTCACTTATGAGAAAGACAAGAATATGAAAATTCAATACTCTTCTGATATACCAGAGTACATTGCTCCTGTTGATGTTTATAGCACTGCAAGATCCATGGGTCCAAATGCCAGTGTCAGTGAGAATTATAACCTCACTTGGATATTTCAAGTGGATGCAAATTTTACCTATCTGGTGAGGTTCCATTTCTGTGAGCTGGAATTTACCAAGATTAATCAGAGAGTGTTTGATATTTTTGTTGGCAATCAAACAGCACAGCTTGGTGCAGATGTTATCGGGTGGGCGGGATCAAAGGGTGTTCCTATTTATAAAGATTTTGCAACTTATGTCATGGATGACCCTGGCGATGAGGAATTGTGGGTGGCCTTGCACCCTACCGTGTCTGTGAAACCGGAATATTTTGATGCAATTCTTAATGGTTTGGAGATTTTTAAGATTAACGACAGCAATGGAAACTTGGCAGGGCTTAATCCCACACCATCCGAGTTGCTTCTTGAAGCTGAAGCTGAAGCTGAAGCATCTGGAGATTCCAGCCCATCAAAACATAAACCAGCTAAAGTAATAGGAGGTGTTGCTGGAGGTGCTGCTGGGCTTGCTGTTGCTGCTGCTGCTGTTTGCTTCATTGCCTATGAAAGAAAGAAAAGAAAAGCTCATGGAACAGGCTCTTCTGCTAGTAATTGGTTACCTATCTACAGCAATTCTCAAGTATTAACAAGCACATCAACTTTTCCTGGCAAGATTAATGGTAGTAGTTATCCTTCAACTGTCAGGCAAGGATTGTGCCGGCATTTTTCATTGTCAGAGATCAGACATGCTACGAAGAACTTCAATGAATCAGAGGTCATTGGTGTTGGTGGGTTCGGGAAGGTTTACAAAGGCATCGTAGATGGAGGGACCAAAGTGGCCGTGAAAAGATCGAATCCGTATTCAGAGCAAGGAGTAATGGAATTTCAGACTGAAATTTATATGCTTTCCAAGCTAAGGCACCGGCATTTAGTCTCCCTAATTGGGTTTTGTGAAGAAAGTGGAGAAATGATCTTAGTGTATGATTACATGGCCAAAGGAACTCTCAGAGAGCACCTTTATAAGAGCAATAAATCAACTTTATCTTGGAAGCAAAGGTTAGAAATATGCATTGGAGCTGCCAAGGGACTGCACTATCTTCATACTGGTGCCAAGTACACAATCATTCACAGGGATGTGAAAACTACAAATATACTATTGGATGAGAATTGGGTAGCAAAAATTTCTGATTTTGGCTTATCAAAAACTGGTCCCAGTCTTCACCAAACCCATGTGAGCACAATGGTGAAAGGTAGCTTTGGTTACTTAGATCCTGAGTACTTTCGTAGACAACAATTAACAGAAAAATCTGATGTTTACTCTTTTGGAGTAGTCCTTTTTGAGGTGTTATGTGCAAGGCCTGCACTTGATGCTAGCTTGCCAAAAGAACAAGTTAGCTTAGCAGATTGGGCTTTGCTGTGCCAAATGAAGGGAAACCTTGAGGACATTATTGATCCTCTGCTTAAAGGCAAAATTAATCCTGAGTGCTTGAACAAGTTTGCAGACACAGCTCGTAAGTGTTTGGCAGGCCATGGCCTTGAACGTCCTTCAATGGGTGATGTGCTATGGAACCTTGAGTTTGCACTTCAGTTGGAAGAAAATCCTTGTCATGGGAAACGTGCTGCAGAAGAGAAGCCAAATGATGGTTATGCTATGCACGACCCCAGATTGACAATTGAGGAAGGAAGGACAAGTAGTGAGCTTGGGGATTCAAAGGACGGCGCAGTTTTTTCACAAATTGTGGATCCAAAAGGAAGATAA	2592	0.4167	MRSNSHILFSLIFLSYTINIIHVESKGKSESDSGFFLISCGSSNGGTDSDGRKWVSDSHYLNSSSETINSTAQTQEPSLPSQIPYMSARIFTSISTYQFPVSPKKRLWVRLYFYPSIYSNFSSPDAYFAVVANGFTLLNNFSASITAKALTQAYFIKEFSLTPVQSGKLNITFIPSSQHSGSYAFINGIEIIPMPDIFKEATLVYATSQTIDIGIYSLQTMFRLNVGGQYIGPTSDSGLSRIWYDDSPYLYGAAYGVTYEKDKNMKIQYSSDIPEYIAPVDVYSTARSMGPNASVSENYNLTWIFQVDANFTYLVRFHFCELEFTKINQRVFDIFVGNQTAQLGADVIGWAGSKGVPIYKDFATYVMDDPGDEELWVALHPTVSVKPEYFDAILNGLEIFKINDSNGNLAGLNPTPSELLLEAEAEAEASGDSSPSKHKPAKVIGGVAGGAAGLAVAAAAVCFIAYERKKRKAHGTGSSASNWLPIYSNSQVLTSTSTFPGKINGSSYPSTVRQGLCRHFSLSEIRHATKNFNESEVIGVGGFGKVYKGIVDGGTKVAVKRSNPYSEQGVMEFQTEIYMLSKLRHRHLVSLIGFCEESGEMILVYDYMAKGTLREHLYKSNKSTLSWKQRLEICIGAAKGLHYLHTGAKYTIIHRDVKTTNILLDENWVAKISDFGLSKTGPSLHQTHVSTMVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPALDASLPKEQVSLADWALLCQMKGNLEDIIDPLLKGKINPECLNKFADTARKCLAGHGLERPSMGDVLWNLEFALQLEENPCHGKRAAEEKPNDGYAMHDPRLTIEEGRTSSELGDSKDGAVFSQIVDPKGR	863

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach5g01067	863	Gene3D	Phosphorylase Kinase; domain 1	502	607	-	-
	Bach5g01067	863	FunFam	FERONIA receptor-like kinase	35	195	-	-
	Bach5g01067	863	PANTHER	OS03G0124300 PROTEIN-RELATED	9	478	IPR046957	GO:0004672
	Bach5g01067	863	CDD	STKc_IRAK	538	803	-	-
	Bach5g01067	863	FunFam	Receptor-like protein kinase FERONIA	608	822	-	-
	Bach5g01067	863	ProSiteProfiles	Protein kinase domain profile.	532	805	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach5g01067	863	SMART	serkin_6	532	805	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach5g01067	863	FunFam	receptor-like protein kinase FERONIA	496	607	-	-
	Bach5g01067	863	FunFam	FERONIA receptor-like kinase	216	403	-	-
	Bach5g01067	863	MobiDBLite	consensus disorder prediction	816	863	-	-
	Bach5g01067	863	Gene3D	-	216	403	-	-
	Bach5g01067	863	Gene3D	-	32	194	-	-
	Bach5g01067	863	Gene3D	Transferase(Phosphotransferase) domain 1	608	823	-	-
	Bach5g01067	863	SUPERFAMILY	Protein kinase-like (PK-like)	508	805	IPR011009	-
	Bach5g01067	863	Pfam	Protein tyrosine and serine/threonine kinase	535	797	IPR001245	GO:0004672\|GO:0006468
	Bach5g01067	863	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	652	664	IPR008271	GO:0004672\|GO:0006468
	Bach5g01067	863	ProSitePatterns	Protein kinases ATP-binding region signature.	538	560	IPR017441	GO:0005524
	Bach5g01067	863	Pfam	Malectin-like domain	38	402	IPR024788	-
	Bach5g01067	863	MobiDBLite	consensus disorder prediction	816	845	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach5g01067	Bach-Chr5	7558839	7561430	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach5g01067	36	863	Receptor kinase-like Gene Family	AT3G51550	56.128	0.0	906

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Bach5g01067		Malectin_like	1.5e-40	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach5g01067	-		-	qsu:111989013	1232.62