Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01063 ATGGCTTCAGCTAGCAGAGCAGCAAATTCTCTCCCCCAGGTTCACCCTTCAACCACTGGAACAAGCCATAGAAGAGGCCAAAATACAGAGTCAATGAGCAAAGCAATTGCTCAGTACACTGAGGATGCTCGCCTCCATGCCGTCTTCGAGCAATCTGGTGAGTCTGGCAGGTCTTTTGATTACTCACAATCTTTAAGAACCACAAACCAGTCTGTGCCGGAGCAGCAAATTAGTGCTTACTTATTGAAAATTCAGAGAGGTGGGTATATTCAACCTTTTGGGGGTATGATTGCCGTCGACGAAGCCACTTTTCGGGTTCTGGGGTACAGCGAAAACGCTTGGGATATGCTGGGTATTAACCCTCAATCGGTGCCGAATCTCGAAAAGGATGAAATTCTCTCGCTTGGAACTGATGTTCGGACGCTTTTCACGCCATCGAGTGTGGCTCTTCTGGAAAAGGCATTCGGAGCACGGGAAATCACCTTGTTGAACCCCATTTGGGTTCATTCTAAGAACTCGGGGAAACCCTTTTATGCGATTTTGCATAGAATTGATGTTGGGATTGTGATTGACTTGGAGCCTGCGAGGACTGAGGACCCTGCCCTGTCCATTGCTGGAGCGGTTCAGTCTCAGAAGCTAGCGGTGCGTGCAATTTCGCAGTTGCAGTCTCTTCCTGGTGGAGATATAAAGCTTTTATGTGATACTGTAGTTGAGAGTGTCAGAGAGCTTACAGGGTATGATAGGGTGATGGTGTATAAATTTCACGAGGATGAGCATGGTGAGGTTGTAGCTGAGAGTAAGAGGGCAGATTTGGAGCCATACATAGGTTTGCATTATCCTGCTACTGATATTCCACAGGCTTCAAGGTTTTTGTTCAAGCAGAACCGAGTTAGGATGATTGTAGATTGCCATGCCACTCCTGTTCAGGTGATTCAGGATGAAGGGCTTATACAGTCTCTGTCTTTGGTTGGATCGACACTTCGTGCTCCTCATGGTTGCCATGCCCAGTATATGGCCAATATGGGATCAATTGCTTCATTGGCAATGGCAGTCATAATCAATGGGAATGATGAGGAAGCCATTGGGGGTCGTAACACAATGAGGTTATGGGGTCTGGTTGTCTGCCATCATACTTCTGCTCGGTGTATTTCTTTCCCCCTACGCTATGCTTGTGAGTTCCTTATGCAGGCCTTGGGGCTCCAACTAAATATGGAACTTCAATTGGCTTCGCAATTATTGGAAAAACGTGTTTTAAGGACTCAAACTCTCTTGTGTGACATGCTTCTTCGAGACTCTTCTACTGCTATTGTTACTCAAAGCCCAAGTATAATGGACCTTGTGAAGTGTGATGGAGCAGCTCTCTACACCCAAGGGAACTACTATCCGCTAGGTGTCACTCCATCTGAGTCCCAAATAAAGGATATTATAGAGTGGTTGTTGGCCTTCCATGGAGATTCAACTGGTTTAAGCACAGATAGTCTGGCTGATGCTGGGTATCCTGGAGCCGCCTCTCTTGGTGATGCAGTTTGTGGGATGGCTGTTGCTTATATCACGAAAAAGGATTTTCTATTCTGGTTCCGATCTCATACAGCAAAAGAGATCAAATGGGGCGGTGCAAAGCATCACCCGGAGGACAAGGATGATGGACAGAGGATGCATCCACGTTCTTCATTCAAGGCATTTTTGGAAGTGGTAAAAAGCCGTAGTTTGCCTTGGGAGAATGCAGAAATGGATGCAATTCACTCTTTGCAGCTCATCCTGCGAGACTCATTTAGAGATGCTCAGCAAAACAATTCTAAGGCTGTTATACGTTCTGAAGTTGGGGGCCTGGAGTTGCAAGGGTTGGATGAGCTAAGTTCTGTGGCTAGAGAAATGGTTAGGTTGATAGACACTGCCACTGCTCCCATATTTGCTGTCGATGTTGATGGTTGCATAAATGGGTGGAATGAAAAGGTTGCTGAATTGACTGCGCTTTCAGTTGCGGATGCTATGGGGAAGTCTTTAGCTCATGATCTAGTGTATAAGGAGTCTGAAGAAACTGTAGAAAGACTACTTTCTCGTGCTTTAAGAGGTGATGAAGATAAGAACGTTGAGATAAAAATGAGGACATTTGGCCCAGAACACCATGAGAAGGCAGTTTTTGTAGTGGTCAATGCTTGCTCCAGTAAGGATTACACAAACAATATAGTTGGAGTATGCTTTGTTGGTCAAGATATTACTGGTCAAAAAGTGGTAATGGACAAGTTTATCCACATACAAGGGGACTACAAGGCTATTGTTCACAGTCCAAGCCCTTTGATCCCTCCCATTTTTGCCTCGGACGATAACACATGTTGCTCAGAATGGAATACTGCCATGGAAAAGCTTACTGGTTGGGCTCGTGGAGATGTCATGGGAAAAACGTTAGTAGGAGAGGTTTTTGGCAGTTGCTGTCGACTGAAGGGTCCAGATGCTCTAACCAAGTTCTTGATTGTTTTGCACAATGCACTTGGTGGACAGGATACAGATAAATTCCCATTTTCTTTCCATGATCAGAACGGAAAATATGTTCAAGCTTTATTGACTGCAAATAAGAGGGTTAACATGGAAGGTCAGGTTATTGGGGCTTTCTGCTTCTTGCAAATTGCTAGCCCTGAACTTCAACAGACTCTGAAAGTCCAGAAGGAACAGGAGAAGAAATGCTCTGCTAGGATGAAAGAGTTAGCTTACATTTGCCAGGAAATAAAGAACCCGCTGAGTGGAATACGGTTCACAAACTCTCTTTTGGGGGCTACAGACTTGACTGATGATCAAAAGCAGTTTCTTGAGACTAGTACTGCCTGTGAAAAGCAGATGTTGAAGATTATACGAGATGCTGATCTGGAGAGCTTCGAAGATGGGTCTTTGGAGCTTGAAAAGGGAGAATTCTTACTTGGAAGCGCCATAAATGCAGTTGTTAGCCAAGTTATGTTGCTGCTTAGAGAAAGAAATTTACAGCTGATTCGTGATATTCCTGAAGAAATCAAGATATTTTCCGTTTATGGTGATCAGTTGAGAATTCAACAGGTCCTGGCTGATTTCTTGTTGAATATGGTGCGATATGCACCGTCTCCAGATGGTTGGGTGGAGATTCAAGTTTGTCCAAGATTAAAACAAATTTCTGATGAACTTACGCTTCTTCATACTGAATTCAGGATGGTATGTCCTGGTGAAGGTCTTCCTCCTGCATTAATTCAAGACATGTTCAATAGCAGTTGGTGGCTGAGTCAAGAAGGCTTAGGACTGAGCATGTGCAGGAAGATTCTAAAGCTAATGAATGGTGAAGTACAGTATATTAGGGAGTCAGAGCGATGCTGCTTCTTAATTATTCTTGAACTGCCTGTGACCCGGAGAGGCTCTTAGAGTGTGAACTAGGTTGCTTGCAACTGTGAGATTCAAGTATTGACCAGTAGATACTTCTGTTATATACCCAGAATATGCTCACCTAACAGGCACTGTAAGAATGGCCAATAAGAAATAA 3499 0.4433 MASASRAANSLPQVHPSTTGTSHRRGQNTESMSKAIAQYTEDARLHAVFEQSGESGRSFDYSQSLRTTNQSVPEQQISAYLLKIQRGGYIQPFGGMIAVDEATFRVLGYSENAWDMLGINPQSVPNLEKDEILSLGTDVRTLFTPSSVALLEKAFGAREITLLNPIWVHSKNSGKPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRELTGYDRVMVYKFHEDEHGEVVAESKRADLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVQVIQDEGLIQSLSLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNDEEAIGGRNTMRLWGLVVCHHTSARCISFPLRYACEFLMQALGLQLNMELQLASQLLEKRVLRTQTLLCDMLLRDSSTAIVTQSPSIMDLVKCDGAALYTQGNYYPLGVTPSESQIKDIIEWLLAFHGDSTGLSTDSLADAGYPGAASLGDAVCGMAVAYITKKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAQQNNSKAVIRSEVGGLELQGLDELSSVAREMVRLIDTATAPIFAVDVDGCINGWNEKVAELTALSVADAMGKSLAHDLVYKESEETVERLLSRALRGDEDKNVEIKMRTFGPEHHEKAVFVVVNACSSKDYTNNIVGVCFVGQDITGQKVVMDKFIHIQGDYKAIVHSPSPLIPPIFASDDNTCCSEWNTAMEKLTGWARGDVMGKTLVGEVFGSCCRLKGPDALTKFLIVLHNALGGQDTDKFPFSFHDQNGKYVQALLTANKRVNMEGQVIGAFCFLQIASPELQQTLKVQKEQEKKCSARMKELAYICQEIKNPLSGIRFTNSLLGATDLTDDQKQFLETSTACEKQMLKIIRDADLESFEDGSLELEKGEFLLGSAINAVVSQVMLLLRERNLQLIRDIPEEIKIFSVYGDQLRIQQVLADFLLNMVRYAPSPDGWVEIQVCPRLKQISDELTLLHTEFRMVCPGEGLPPALIQDMFNSSWWLSQEGLGLSMCRKILKLMNGEVQYIRESERCCFLIILELPVTRRGS 1126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01063 1126 Gene3D - 209 567 IPR029016 -
Bach5g01063 1126 ProSiteProfiles PAS repeat profile. 621 692 IPR000014 -
Bach5g01063 1126 ProSiteProfiles Phytochrome chromophore attachment site domain profile. 228 396 IPR016132 -
Bach5g01063 1126 Pfam PAS fold 624 739 IPR013767 GO:0006355
Bach5g01063 1126 Pfam PAS fold 755 874 IPR013767 GO:0006355
Bach5g01063 1126 ProSiteProfiles PAS repeat profile. 755 807 IPR000014 -
Bach5g01063 1126 SUPERFAMILY PYP-like sensor domain (PAS domain) 769 873 IPR035965 -
Bach5g01063 1126 Gene3D PAS domain 619 743 - -
Bach5g01063 1126 ProSiteProfiles Histidine kinase domain profile. 903 1123 IPR005467 -
Bach5g01063 1126 CDD PAS 632 739 IPR000014 -
Bach5g01063 1126 Gene3D - 877 958 - -
Bach5g01063 1126 PIRSF Phytochrome_conventional 13 1126 IPR012129 GO:0006355|GO:0009585|GO:0009881|GO:0017006|GO:0042803
Bach5g01063 1126 Gene3D PAS domain 768 876 - -
Bach5g01063 1126 FunFam Phytochrome 617 749 - -
Bach5g01063 1126 Pfam PAS fold 79 195 IPR013654 GO:0006355
Bach5g01063 1126 ProSitePatterns Phytochrome chromophore attachment site signature. 328 337 IPR013516 -
Bach5g01063 1126 SUPERFAMILY GAF domain-like 414 594 - -
Bach5g01063 1126 CDD HisKA 896 951 IPR003661 GO:0000155|GO:0007165
Bach5g01063 1126 SUPERFAMILY PYP-like sensor domain (PAS domain) 628 736 IPR035965 -
Bach5g01063 1126 Gene3D PAS domain 83 331 - -
Bach5g01063 1126 CDD HATPase_Phy-like 1007 1119 IPR044767 -
Bach5g01063 1126 Gene3D - 959 1124 IPR036890 -
Bach5g01063 1126 Pfam Phytochrome region 419 592 IPR013515 GO:0006355|GO:0009584
Bach5g01063 1126 SMART HKATPase_4 1008 1121 IPR003594 -
Bach5g01063 1126 FunFam Phytochrome 768 876 - -
Bach5g01063 1126 SMART HisKA_10 896 960 IPR003661 GO:0000155|GO:0007165
Bach5g01063 1126 NCBIfam PAS domain S-box protein 628 743 IPR000014 -
Bach5g01063 1126 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 885 951 IPR036097 GO:0000155|GO:0007165
Bach5g01063 1126 SMART gaf_1 228 416 IPR003018 GO:0005515
Bach5g01063 1126 FunFam Phytochrome 411 541 - -
Bach5g01063 1126 SUPERFAMILY PYP-like sensor domain (PAS domain) 84 196 IPR035965 -
Bach5g01063 1126 PANTHER OS08G0260000 PROTEIN 75 958 - -
Bach5g01063 1126 SMART pas_2 623 690 IPR000014 -
Bach5g01063 1126 SMART pas_2 754 824 IPR000014 -
Bach5g01063 1126 Pfam GAF domain 228 406 IPR003018 GO:0005515
Bach5g01063 1126 MobiDBLite consensus disorder prediction 1 31 - -
Bach5g01063 1126 SUPERFAMILY GAF domain-like 208 403 - -
Bach5g01063 1126 PRINTS Phytochrome signature 521 540 IPR001294 GO:0006355|GO:0009584
Bach5g01063 1126 PRINTS Phytochrome signature 643 658 IPR001294 GO:0006355|GO:0009584
Bach5g01063 1126 PRINTS Phytochrome signature 243 262 IPR001294 GO:0006355|GO:0009584
Bach5g01063 1126 PRINTS Phytochrome signature 554 572 IPR001294 GO:0006355|GO:0009584
Bach5g01063 1126 PRINTS Phytochrome signature 436 456 IPR001294 GO:0006355|GO:0009584
Bach5g01063 1126 PRINTS Phytochrome signature 717 734 IPR001294 GO:0006355|GO:0009584
Bach5g01063 1126 PRINTS Phytochrome signature 143 165 IPR001294 GO:0006355|GO:0009584
Bach5g01063 1126 PRINTS Phytochrome signature 737 757 IPR001294 GO:0006355|GO:0009584
Bach5g01063 1126 PRINTS Phytochrome signature 328 349 IPR001294 GO:0006355|GO:0009584
Bach5g01063 1126 PRINTS Phytochrome signature 624 640 IPR001294 GO:0006355|GO:0009584
Bach5g01063 1126 Gene3D - 411 584 IPR043150 -
Bach5g01063 1126 FunFam Phytochrome 877 958 - -
Bach5g01063 1126 CDD PAS 766 874 IPR000014 -
Bach5g01063 1126 Pfam His Kinase A (phospho-acceptor) domain 900 959 IPR003661 GO:0000155|GO:0007165
Bach5g01063 1126 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 972 1117 IPR036890 -
Bach5g01063 1126 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1008 1119 IPR003594 -
Bach5g01063 1126 FunFam Phytochrome 959 1125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01063 Bach-Chr5 7526925 7532587 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01063 4 1121 Histidine Kinase Gene Family AT4G16250 73.959 0.0 1739
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01063 K12121 - zju:107418995 1976.44