Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01060 ATGGCTTCTCAATCATCTTTTTCTTTGCATTCTTTAGATATATTCATGGTGCTGCTCATCCTTTTCATGATCTCATTCTTCTGCCTCCCATATCATACTCTTGCCATTGATGCACAAGCGGTCATAGATTCTCCTTTGTTGACCAAAAAGATAGGCACAAATCGCACTATCAAGGTGGATATCAATGGCAACGGTGACTTCAAATCTATCCAAGCTGCCATAGATTCCATTCCTGAAGGAAATTCTAATTGGGTTATTGTTCATATTAGGAAAGGGATATACAGGTACTTAATTAACTTGCTCATTCATGATGTATGGGTTTACAGAGCCCAGTTTCTTAATGCATTTTTTAATTTGACAACGTGCAGGGAAAAGGTACACATACCAAAGAGCAAGCCCTACATATTCATGAGAGGGAATGGAAGAGGAAGAACTGCCATAGTTTGGTCCCAGAGCTCTTCAGACAATGTGGCTTCTGCTACCTTTAAGGCTGAAGCTCATAATTTCATTGCCTTTGGTATTAGCTTCAAGAATGATGCACCAACAGGAATTGCTTATACCTCACAAAATCAATCGGTGGCAGTATTTGCTGCAGCAGACAAGATGGCATTTTACCACTGTGCATTTTTCAGCACACACAACACTCTATTTGATTACAAAGGCAGCCATTACTATGACTCCTGCTACATTCAAGGTTCAATAGACTTCATTTTTGGCCGCGGCAGATCCATCTTTCATAGCTGTGAGATATTTGTTGTTGATGACAAAAGGGTTTCAATTCATGGGTCAATCACAGCTCAAAATAGAGAAAGTGATCATGAAGATAGTGGGTTTGTGTTTCTCAAAGGCAAGGTCTATGGCATTGGTGGTGTGTACTTGGGAAGGGCTAAGGGTGCTTATTCTAGGGTTCTTTTTGCCAGGACATACCTCTCCAAGACCATTGTGCCCGAGGGCTGGACCAATTGGAGCTATGCTAGTGGCACACAAAATCTGTTCCATGCGGAGTACAAGTGCTATGGACCTGGATCTGAGTCAAGTAAACGTGCTTCTTGGTCGAAGCAGCTTACAGACAAAGAAGCTGCTTCCTTTTTGTCTATTGATTTTATTGAAGGCACGAAATGGCTGCCAGTGTGGCTATAA 1140 0.4167 MASQSSFSLHSLDIFMVLLILFMISFFCLPYHTLAIDAQAVIDSPLLTKKIGTNRTIKVDINGNGDFKSIQAAIDSIPEGNSNWVIVHIRKGIYRYLINLLIHDVWVYRAQFLNAFFNLTTCREKVHIPKSKPYIFMRGNGRGRTAIVWSQSSSDNVASATFKAEAHNFIAFGISFKNDAPTGIAYTSQNQSVAVFAAADKMAFYHCAFFSTHNTLFDYKGSHYYDSCYIQGSIDFIFGRGRSIFHSCEIFVVDDKRVSIHGSITAQNRESDHEDSGFVFLKGKVYGIGGVYLGRAKGAYSRVLFARTYLSKTIVPEGWTNWSYASGTQNLFHAEYKCYGPGSESSKRASWSKQLTDKEAASFLSIDFIEGTKWLPVWL 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01060 379 Gene3D - 51 378 IPR012334 -
Bach5g01060 379 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 49 375 - -
Bach5g01060 379 SUPERFAMILY Pectin lyase-like 122 377 IPR011050 -
Bach5g01060 379 FunFam Pectinesterase 51 379 - -
Bach5g01060 379 Pfam Pectinesterase 123 371 IPR000070 GO:0030599|GO:0042545
Bach5g01060 379 SUPERFAMILY Pectin lyase-like 53 103 IPR011050 -
Bach5g01060 379 ProSitePatterns Pectinesterase signature 2. 230 239 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01060 Bach-Chr5 7501155 7503060 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01060 14 375 Carbohydrate Esterase AT5G47500 34.474 1.22e-67 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01060 - - jre:108994779 556.214