Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01050 ATGAACGACGATCACATCAGAATTTACTCCCACCAGAACGAAAGACCTCATAGACAAAGAGTCTTCACCGTCCAATGCTTCCAACACCGCATCCGCACCACCGTTACATCCACCCCAGCCGTCGTACGAAACTGGCTCTTCTTCATCCGCCGCCTCCACTACCGCCGCCGCCACAACCTCGTCGTTGGGCTCGGCGTCCAGTGGCGCCCATCATACTCCAACACGCCGCCGCAAGCTGCCACTCTCCAACTCTGCGTCGGCGGCCGTTGCCTCATCTTCCATCTCCACCACGCAGCGTCTGTCCCGATCGCTCTCCGGCGATTCCTCTGTGACCCTCTTAACACCTTCGTAGGAGTGCAGAACTACATGGATCGGAGTATGCTCTCGAAGTGCAGACACAACATCTTAGTTTCCAACATTCTAGATGTTCGAGCGATTGCAGCGGCGGAGAGAGGTTTGGGTCTGATGATTTCAATGGAGAAGTTAGCTGAGATACTGCTGGGTTTCGGAAACGTGAAGAAGCCGAACTGGATTGGCAGGAGCGATTGGAATTCTTCTTGGCTTAGTGATGACCAGGGTTTCACTCAGTTGGCCAAGCTGGATAGGTACAGAGGAGACCGCTATGGTAACGACCATGACTATGACTCTCCCCACTACCGCCACTCCAGAGGCCCTTCTCGATTCTCCGATGCTCCTTTCAACTACCATAACAACCGCCGTAGCCCCGGAAACTTCCGCTCCGGCGGCGGCGGCGGCGATAACCGCCGTGCTTTTTATAGTCCGCCGCACCGTTCTCCCGGAAGTGGTGGAGGGTTCCGGCCATACGGTGGTCCCGGTGGTGGAGATGGATTAAGTCCAATGAGTGGTGGGAGTCCCGGAGGGTTTGGGTTTAACGATCGGCAGGCACCACCAGTGTCTGGTCAGAAAAGAGGGTTTCCCTTCTCTGGACGAGGAGGTTCACCAGATCGTTTCAACGGCCGAAGTTTTGCTAAACTTTTTGTTGGATCTGTTCCTCGGACAGCCACTGAGGAAGATATTCGCCCTTTGTTTGAGGAACATGGAACTGTGATTGAGGTTGCTCTGCTTAAGGATAAAAAAACAGGACAACAGCAAGGTTGTTGTTTCATAAAGTATGCTACGTCGGAAGAAGCTGATCAAGCAATCAGAGCATTACACAATCGACATACTCTTCCTGGAGGAGTAGGTCCAATCCAAGTGAGATATGCTGATGGTGAACGGGAACGCCTTGGTGCAATGGAGTACAAACTATTTGTGGGCTCTCTGAACAAGCAGGCTACTGTAAATGAAGTTGAGGAAATTTTCTCAAAATATGGACGTGTTGAAGATGTTTATCTTATGCGTGATGAAAAGAAGCAAAGCCGTGGATGTGGTTTTGTTAAATACTCTCACAGAGATATGGCACTGGCAGCTATAAATGCTCTTAATGGAATTTATACTATGAGAGGTTGCGATCAACCATTAACTGTTCGGTTTGCTGATCCTAAGAGACCCCGGCAAGCAGATTCAAGAACTCCTGCATTTGGAGGTCCTGGATTTGGTCCTAGATTTGAAGCACCAGTCCCCAGACCAGCATCCAATCTTGTTGACCGTACGGGCAATGGTATTCCTCCCCCTAATATGTGGCATCCAATGCCTCCACCAAATATGGGGATGCCATCTAGCACTGGGCTTCAAGGTATGGGACCTCCATTGCTGTCAAGATCTGGTGACATGACATTTCCTTTAAATGCTGGTGGTCCTGTGAGAGGCATGGTAGGCCCCTTAGATGGTCCTTTTCAAGGACAGGCTTTGTCGTCTTCGATGTCCCAACAGAGTTTCAACCAGTCTACAGCACAAATTCCACCAGTTGGTCAACAAATATCACCAATGCAGAAACCTCTTCAATCACCTCGGGACTTGCCTTCTTCACTCCAGTTGTCTCAAGCTACAATGCCCCACTCCCAGGCACCAGCATCCCTAGCACCAGTTAAGCGGCTTGGCCAGCCACAACTTCCTCCATCTACTGGTCCTCCTTCATCATGGCCAGTAGTTGGCATAAGTGGGCAGTTTCCACCTTCTCAGCCCCAAGTTCACCAGAGTGCTCCATCTGCTGTGATTCCTCAGGCCCCTCTTGATTCTAGGTTGCAGTCTAATACAGCATTGACATCTTCAAATCAACAGAAATTTCCTGCATTGGTGCAACATCAGTCACTTCAGGAGTCACCATCTCAGTTAGCTCAGATGTTGTCACAACAGACTCAGAACTTACAAGCTAGCTTCCATTCATCTCAGCAGGCTTTCTCCCAGCTTCAGCAACAACTACAGATGATGCAACCATCTAGTCAAGGTTTACCATTACAGCAAAGTGCAGAAGCTACTACAAAGCAGTCCCAATGGTCTGGAACTGCACCACAGGCAGTTGCCAGCACTCCTTCAGCTGCACCAACTGCAGATGTGCTTTCATCCTCATCTGCTGCTACATCTGCTGCTTCTTCTGTACCCATGATAAACCATAATATGCCTAATTTAAAATCTAATTGGACAGAGCATACATCTCCTGATGGTTACAACTACTACTATAATAGTTTTACTGGTGAAAGTCGGTGGGAGAAACCTCAGGAGTTAATATTATCTGAAGCACAAAAGCAACATCAAAGCTCATCTGTTCAGCAGTCCCAAACTCAGTCACAACCTACAATATTATCTGCCCAGCAGGTTCCACAAATTCCACAGGTGCAGCCTCAAGGCCAGGCTCAATCACAGGTTCTCCCTCAGCAAGAGATGCAACAGCCTTCTTTATCTAATTCTTACCAGGCTTATGGGGTTGCTAGTCATCAAAGTGTTCAGGAAGTTGGTTATACACACTTACAAGCATCAACAAATTCTATGGGTAATCCTGCACGCTTTCCTCAGGGAGTTCATGCTACCCAGGATTGGATGTGGAAAAGCAAGCCAGCAGGTTCTGGACCTTTGGAATTTAAGCTATAATGGACTGATCTTGAGATGGCACATGGAGGAGACAAGCTACTGCTTTTCAATGGATGAGGAACAAGAAGAACTTTAATCTCTATGCTTGAAAGCAGGACTGCAATTTAAAATTGACATGGTTTCAGCAGTTGTTTGCAGTCGTCAGTTTTTGTCCTCATTATCGTGGTTTTCACCGTCATGTACTCGCTCAGCATTAAAATTAAAGCCTGAGGTGGGGTTATTACATATAGCAATTAAGTGCCCTACGCAGAACCAGAATGTCTTGTGTAACATAAATTTTGTTACGATTACATGTTTAACCTAACAGTTAATTTTTATAGTTTTTGCTTGGTGCTG 3324 0.478 MNDDHIRIYSHQNERPHRQRVFTVQCFQHRIRTTVTSTPAVVRNWLFFIRRLHYRRRHNLVVGLGVQWRPSYSNTPPQAATLQLCVGGRCLIFHLHHAASVPIALRRFLCDPLNTFVGVQNYMDRSMLSKCRHNILVSNILDVRAIAAAERGLGLMISMEKLAEILLGFGNVKKPNWIGRSDWNSSWLSDDQGFTQLAKLDRYRGDRYGNDHDYDSPHYRHSRGPSRFSDAPFNYHNNRRSPGNFRSGGGGGDNRRAFYSPPHRSPGSGGGFRPYGGPGGGDGLSPMSGGSPGGFGFNDRQAPPVSGQKRGFPFSGRGGSPDRFNGRSFAKLFVGSVPRTATEEDIRPLFEEHGTVIEVALLKDKKTGQQQGCCFIKYATSEEADQAIRALHNRHTLPGGVGPIQVRYADGERERLGAMEYKLFVGSLNKQATVNEVEEIFSKYGRVEDVYLMRDEKKQSRGCGFVKYSHRDMALAAINALNGIYTMRGCDQPLTVRFADPKRPRQADSRTPAFGGPGFGPRFEAPVPRPASNLVDRTGNGIPPPNMWHPMPPPNMGMPSSTGLQGMGPPLLSRSGDMTFPLNAGGPVRGMVGPLDGPFQGQALSSSMSQQSFNQSTAQIPPVGQQISPMQKPLQSPRDLPSSLQLSQATMPHSQAPASLAPVKRLGQPQLPPSTGPPSSWPVVGISGQFPPSQPQVHQSAPSAVIPQAPLDSRLQSNTALTSSNQQKFPALVQHQSLQESPSQLAQMLSQQTQNLQASFHSSQQAFSQLQQQLQMMQPSSQGLPLQQSAEATTKQSQWSGTAPQAVASTPSAAPTADVLSSSSAATSAASSVPMINHNMPNLKSNWTEHTSPDGYNYYYNSFTGESRWEKPQELILSEAQKQHQSSSVQQSQTQSQPTILSAQQVPQIPQVQPQGQAQSQVLPQQEMQQPSLSNSYQAYGVASHQSVQEVGYTHLQASTNSMGNPARFPQGVHATQDWMWKSKPAGSGPLEFKL 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01050 995 FunFam Flowering time control protein FCA 417 507 - -
Bach5g01050 995 FunFam flowering time control protein FCA isoform X2 324 416 - -
Bach5g01050 995 MobiDBLite consensus disorder prediction 592 704 - -
Bach5g01050 995 MobiDBLite consensus disorder prediction 680 703 - -
Bach5g01050 995 Gene3D - 419 510 IPR012677 -
Bach5g01050 995 Gene3D - 323 418 IPR012677 -
Bach5g01050 995 SMART rrm1_1 422 497 IPR000504 GO:0003723
Bach5g01050 995 SMART rrm1_1 331 407 IPR000504 GO:0003723
Bach5g01050 995 SUPERFAMILY RNA-binding domain, RBD 315 415 IPR035979 GO:0003676
Bach5g01050 995 SUPERFAMILY WW domain 836 875 IPR036020 GO:0005515
Bach5g01050 995 SUPERFAMILY Ribonuclease H-like 44 192 IPR012337 -
Bach5g01050 995 Gene3D - 825 897 - -
Bach5g01050 995 ProSiteProfiles WW/rsp5/WWP domain profile. 841 874 IPR001202 GO:0005515
Bach5g01050 995 MobiDBLite consensus disorder prediction 600 655 - -
Bach5g01050 995 ProSitePatterns WW/rsp5/WWP domain signature. 847 872 IPR001202 GO:0005515
Bach5g01050 995 CDD WRN_exo 36 192 - -
Bach5g01050 995 PANTHER RNA BINDING PROTEIN 288 795 - -
Bach5g01050 995 SMART ww_5 842 874 IPR001202 GO:0005515
Bach5g01050 995 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 423 489 IPR000504 GO:0003723
Bach5g01050 995 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 332 394 IPR000504 GO:0003723
Bach5g01050 995 Gene3D - 18 201 IPR036397 GO:0003676
Bach5g01050 995 MobiDBLite consensus disorder prediction 209 225 - -
Bach5g01050 995 Pfam WW domain 843 872 IPR001202 GO:0005515
Bach5g01050 995 CDD WW 844 874 IPR001202 GO:0005515
Bach5g01050 995 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 330 411 IPR000504 GO:0003723
Bach5g01050 995 SUPERFAMILY RNA-binding domain, RBD 421 520 IPR035979 GO:0003676
Bach5g01050 995 MobiDBLite consensus disorder prediction 209 307 - -
Bach5g01050 995 MobiDBLite consensus disorder prediction 771 819 - -
Bach5g01050 995 MobiDBLite consensus disorder prediction 879 930 - -
Bach5g01050 995 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 421 501 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01050 Bach-Chr5 7413450 7426296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01050 328 507 Eukaryotic Initiation Factors Gene Family AT1G71770 26.531 1.70e-14 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01050 - - gmx:100786792 840.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g01050 5 7413450 7426296 Bach5g01050 5 7413450 7426296 ECH