Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01036 ATGCCGAACCAGATGTTCATCCCCCAATTCAGCAAGGGTGATCAGGTAGAGGTCTTCAAGCAGAACTCCAACTCATTTTACCCTGCTTTGGTGCTACGCGAACCGGTCAAGGCTAAGAACCTCGTGTTTGTTGAGTACCAAACCCTGTTCTCTTCTTCGGAGGATGACTTGCCGGGACCAGCAAAACCTCGCAGGGAGTTCATCAATGTAGCTAACGTGAGGCCCAAGGCTCCACGTGATCTTATCCTATGCTTCAAAATCGGTGATTGCGTAGAGGGGTTTCGCAAAAATGCTTGGTGTCCTGGTACCATCAGGGAGATCTGCGAAAATTCCAAGTATTTGGTGGCATTTGACGGTGGAAATAAAGAAATTGCTGAAATTGAGCAATGCAGTTTGCGGCTTCACCGAAAATGGGTTAATGGGTCTTGGGTGCCACCTATACCTGAACAGGTTAAGGAACCTCCCAAATGCTCCATCAAGTGTAACTTATCTACAGCAACTACAGAGAGCCAAGAGAAGCCACATGAGGTGAAGATGGAGACAAATCCTGGAGAATGGAGGTTTAAGATGAAATACAGCAGGAAACTACGGGGTACAAAGTTGAAAAAAGGGATGGTGGTGGAAGTCAGCAGTGATGAGGAAGGTTACAAGGGTGCTTGGTTTATTGCAACTATTGTTGACTCAATAAGAAATGAAAGGTTTCTGATTGAATATAGGGACCTGACAACAGGTGATGGATCCCAGCTTTTAAAAGAAGAAGCAGATGCAAGGCATGTTAGGCCTTGCCCACCACAAGTTCCATCAGTTGTTTCTTTTGAACAGTTCCAAGAAGTTGATGTATGGCATAATGATGGGTGGTGGGAGGGCATTGTTGTCAAAAAATCAAAGAGCAGAAAATATTATGTTCATTTCATGCCTTCCAATGAGGTAATGGAATTTGAAATGTCAAAACTGAGGCCTCATCAAAATTGGGTCAATGGAAAATGGGTCATGTCTTCTAAGGGGTCAAATGAGCTGGCAAAGAAGAGGTCTGGAGGTGTAATGTCAAAGACCAAGGGCACTGAAAAGAAACTAATCATTAAATTTGCGGGGTCAAATGAGCTGGCAAAGAAGTCTGGAGATGTAATGTCAAAGACCAAGGACACAGGAAATGTACCGAGGGTACCTTTCTCTAAAGGTGCAAAAGTAGAAGTCAGAAGTGATGAAGAAGGTTACCAAGGTGCTTGGTATGCTGCTGTTATTGCTGGTGTTATGCGGAATGGAAAGTACTTGGTGGAGTATCAGACCCTGAAGACGGATGACTTAACTGAACAACTTAAAGAAGAAGCAGAAGCTTCAGATATCAGGCCATATCCACCAGACACCAACCATCTTCACCCGTTTGCACTGTATGAAAAAGTTGATGCTTGGTATAATGATGGATGGTGGGTGGGTCAGATAGCCAAGGTTCTTCGTGGCTTGAAGTATATAGTTTACTTTTTGCCTACAAATGAGATGCTGGAATTTGAACACACTGATCTGAGGCCTCATCAAGAATGGATAGATGGAAAATGGATGATTTCTCCTTAG 1569 0.4379 MPNQMFIPQFSKGDQVEVFKQNSNSFYPALVLREPVKAKNLVFVEYQTLFSSSEDDLPGPAKPRREFINVANVRPKAPRDLILCFKIGDCVEGFRKNAWCPGTIREICENSKYLVAFDGGNKEIAEIEQCSLRLHRKWVNGSWVPPIPEQVKEPPKCSIKCNLSTATTESQEKPHEVKMETNPGEWRFKMKYSRKLRGTKLKKGMVVEVSSDEEGYKGAWFIATIVDSIRNERFLIEYRDLTTGDGSQLLKEEADARHVRPCPPQVPSVVSFEQFQEVDVWHNDGWWEGIVVKKSKSRKYYVHFMPSNEVMEFEMSKLRPHQNWVNGKWVMSSKGSNELAKKRSGGVMSKTKGTEKKLIIKFAGSNELAKKSGDVMSKTKDTGNVPRVPFSKGAKVEVRSDEEGYQGAWYAAVIAGVMRNGKYLVEYQTLKTDDLTEQLKEEAEASDIRPYPPDTNHLHPFALYEKVDAWYNDGWWVGQIAKVLRGLKYIVYFLPTNEMLEFEHTDLRPHQEWIDGKWMISP 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01036 522 Pfam Agenet domain 204 264 IPR008395 -
Bach5g01036 522 Pfam Agenet domain 13 77 IPR008395 -
Bach5g01036 522 Pfam Agenet domain 393 453 IPR008395 -
Bach5g01036 522 SMART agenet_At_2 199 267 IPR014002 -
Bach5g01036 522 SMART agenet_At_2 83 140 IPR014002 -
Bach5g01036 522 SMART agenet_At_2 459 515 IPR014002 -
Bach5g01036 522 SMART agenet_At_2 270 326 IPR014002 -
Bach5g01036 522 SMART agenet_At_2 8 69 IPR014002 -
Bach5g01036 522 SMART agenet_At_2 388 456 IPR014002 -
Bach5g01036 522 CDD Tudor_Agenet_AtDUF_rpt2_4 87 134 - -
Bach5g01036 522 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 9 181 - -
Bach5g01036 522 CDD Tudor_Agenet_AtDUF_rpt1_3 201 264 - -
Bach5g01036 522 CDD Tudor_Agenet_AtDUF_rpt1_3 390 453 - -
Bach5g01036 522 CDD Tudor_Agenet_AtDUF_rpt2_4 465 509 - -
Bach5g01036 522 CDD Tudor_Agenet_AtDUF_rpt2_4 276 320 - -
Bach5g01036 522 Gene3D - 189 272 - -
Bach5g01036 522 Gene3D - 381 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01036 Bach-Chr5 7332612 7337353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01036 399 513 PHD Transcription Factor Family AT5G58610 27.941 3.36e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01036 - - adu:107483399 493.041