Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01033 GCAAAAGCTAGCTACCTCAACCAAAACCTTCTGATCGTGTTCCCATCGATCAGCAAACCAAAAATGGATGTAAACGAAAGAGGAAGCAACAGCAACACCATCCACAGCGACGACGAGATGGACCTCCGGCGAGGCCCATGGACCGTCGACGAGGACCTCACCCTCATCAATTACATTGCCAATCACGGCGAAGGTCGCTGGAACTCTCTTGCTCGCTCCGCCGGCCTCAAAAGAACTGGTAAGAGCTGCAGATTAAGGTGGCTGAACTATCTCCGCCCTGATGTTCGACGTGGAAACATCTCACTAGAAGAACAACTCCTAATTCTTGAGCTCCATACTCGCTGGGGAAACAGATGGTCCAAAATTGCGCAGTTCTTGCCTGGAAGAACTGACAATGAGATCAAGAACTATTGGAGGACCCGTGTTCAAAAGCATGCCAAACAGCTTAAATGTGACGTGAATAGCAAGCAATTCAAGGACACCATGCGTTATCTTTGGATGCCAAGGCTGGTGGAGCGAATTCAAGCCGCTGCGGCTGGTGCTGCCGTCCCCACCACCACCGTGGGCTCGTCGACATTATCTACCACCACAACCGTCACTGCCAACACCGCATACAATTATAACAACAATTTTGAGGTACACAATGGGAACATGGTGTTTGGGGGATCCCAGGTTAAACAAAGTTACACTCCAGAGAACAGCAGCACAGCTGCTTCATCAGACTCGTTTGGGACTCAGGTTTCACCTGTCTCGGATTTGACGGAATATTACAGTGTCCCGGCTAGTAACAACAATAACACTAACCCGGATTACTATCAACCCGCTCAAGTAAGCTACTCGGACTGCATCACCAGCCCCTCTGGGTTCTTCTCAAATGGACTGGATTTCCAAGCCACGGATCCAAACAACCAGTGGATTCAGAGTGGGGACACATCGGACAATTTCTGGAATGTTGAGAACATGATGTTTTTACAGCAGCAACTCATGAATGACAACATGTGA 1002 0.491 MDVNERGSNSNTIHSDDEMDLRRGPWTVDEDLTLINYIANHGEGRWNSLARSAGLKRTGKSCRLRWLNYLRPDVRRGNISLEEQLLILELHTRWGNRWSKIAQFLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAAAGAAVPTTTVGSSTLSTTTTVTANTAYNYNNNFEVHNGNMVFGGSQVKQSYTPENSSTAASSDSFGTQVSPVSDLTEYYSVPASNNNNTNPDYYQPAQVSYSDCITSPSGFFSNGLDFQATDPNNQWIQSGDTSDNFWNVENMMFLQQQLMNDNM 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01033 312 SUPERFAMILY Homeodomain-like 20 117 IPR009057 -
Bach5g01033 312 Pfam Myb-like DNA-binding domain 76 119 IPR001005 -
Bach5g01033 312 Pfam Myb-like DNA-binding domain 23 70 IPR001005 -
Bach5g01033 312 MobiDBLite consensus disorder prediction 203 225 - -
Bach5g01033 312 ProSiteProfiles Myb-like domain profile. 18 70 IPR001005 -
Bach5g01033 312 FunFam Myb transcription factor 23 75 - -
Bach5g01033 312 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 75 125 IPR017930 -
Bach5g01033 312 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 18 74 IPR017930 -
Bach5g01033 312 SMART sant 75 123 IPR001005 -
Bach5g01033 312 SMART sant 22 72 IPR001005 -
Bach5g01033 312 Gene3D - 79 143 - -
Bach5g01033 312 FunFam MYB transcription factor 80 143 - -
Bach5g01033 312 ProSiteProfiles Myb-like domain profile. 71 121 IPR001005 -
Bach5g01033 312 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 18 240 IPR044676 GO:0003700|GO:0006355|GO:0043565
Bach5g01033 312 CDD SANT 96 119 IPR001005 -
Bach5g01033 312 CDD SANT 25 70 IPR001005 -
Bach5g01033 312 Gene3D - 20 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01033 Bach-Chr5 7290220 7291876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01033 3 297 MYB Transcription Factor Family AT3G06490 55.205 1.97e-93 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach5g01033 Myb_DNA-binding 3e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01033 K09422 - gmx:100791349 449.129