Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01023 ATGGCAACGGCAGAGGCAGCTCCAGCTGCCCTTGGTCCTCGATATGCACCTGATGATCCCACACTTGCTAAGCCTTGGAAGGGTTTGATTGATGGAAGCACTGGTGTGTTATACTATTGGAATCCTGAAACCAACATAACCCAATATGAAAAACCTGCAACATTGCCCCCACCCTTGCCTGCAGGCCCACCTCCTGTGGCTTCTATGCCCGAGCAGGATCCTATACCAGCGGGTCATTCAATGCCACCTAGTGGGATGGCGGCACAGCAAGTACAAAAGCTCCTGCAAGGCTCACAATTTCAGGGACAGCAAGTGATAAACCAACCTCAACAGCATGGGCAAGCTATGCCACAACAGCAGAGTCCCCTGCTGGCACAAGTCACTCAGCAACAGCAGTCTTCTCATGTAGCACAAGCTGCTGGGCAGCAACAAAATACACAGCCGATTCAGTCCATGCCACAGCCTGGGTTGCAGCAAGTTAGACAGCCAATGATGCAGCCCCAGGGTCAACAAATGGCACAGCCTTCAAGCCTGCAAATGCATCATCAAATGCCACAGCAAGTTATCCAATCCCAACATTTTGGGCAAGGAACAAGTCAGGATCATGGATCACATATAGTGCAGCCACAAGCACATCAGTTCCCTCATCATACTTTTCATTTTATGTCATATCAGCAAAACATGCTTTCTGCTGGGCTGCAAAACCCCCAGCAGACTCAACATAACATGCACAGTCAGCCATATGAAAATCAGCGAGAGTTTAAGCCAGCACTCCCGAAGATAGAGGAAGGAGATTTTAAAAATGCGAGTCAAGTCGGACTTTCACCATCCCAATATCAACCAAAGGGTGCCATGTCTGTTCAAAACAATCAGAATATTCCTGCTGGAATCAGTTCTGTGCAGGTGCCACAAGTAGCTGTTAATGCTGGCCAACTGCCACAGTTTGGTAGCATGTCTGGCAGTGTGCAACAGTCTCCATCTGCAATGCAGTCACAGCAAGGTAGTTCTGATTTTGTTTATCAACACGGCCCCAACTTTCAAAACCAGATGGGCCCAGGAATGATGCTTGGCCAGCCATCCAATGCCCCCCCAGTTGGCCTAAAGGCAGGACGTGATGATAATTTGCATGGTAGAGCTGGGAATGAACATTACAATAACTCTAGCAAAGAGATTCCAGCTATGGGTCCTCAGCAGCCAAATATTGCACCAATACCCATTTCAAGAAATCAGCAGAATATGAGGATCAGCAATGCCCCTTTTCCAAATGCCATGCCTGGTGGAAATGGTTTAAGTGGTATCCCAGGGCATTCATTGCATAACATGTTTAGTCCTCCAACAGGAGTACCTCCGCCACTCTCAAGCAACTCATTATTTAGGCCACCTTTCATTAAATCTTCAGATGTGACTGACCTCTCACCTACTGAAATTTACTGTCAGCAACATGAAGTTACAGCAACGGGAGACAATGTTCCACCACCATTCATGACATTTGATGCTGCTGGTTTCCCTCCAGAGATTTTGAGAGAGATGTATTCTGCTGGCTTCTCGTCTCCAACACCAATCCAGGCTCAAACATGGCCTGTTGCACTACAGGGTAGGGACATAGTGGCAACTGCCAAGACAGGCTCTGGAAAAACATTGGGCTATATAATCCCTGCATTCATTCTTCTCAGACAACGGCGCAATAATCCTCTGAATGGCCCAACAGTGTTGGTTTTGGCTCCAACACGTGAACTTGCAACACAGATCCAGGATGAGGCCATTAAATTTGGCCGATCTTCACGTGTCTCTTGCACGTGCTTATATGGAGGAGCATCCAAAGCACTTCAGTTAAAGGAGTTAGATCGTGGAGCAGACATTGTTGTTGCCACACCTGGTCGGCTCAATGACATACTTGAAATGAAGAAAATTGATTTTCAGCAAGTTTCGCTTCTTGTGCTTGATGAGGCTGACCGAATGCTTGATATGGGTTTTGAGCCTCAAATCCGTAAGATTGTGAATGAAATACCACCACGCAGACAAACTCTTATGTACACAGCAACCTGGCCAAAAGAAGTAAGAAAAATTGCCAGTGATCTTCTTGTTAATCCTGTCCAGGTCAACATTGGAAGTGTTGATGAGCTTGCTGCAAATAAAGCTATCACCCAGTATGTTGAAATTGTCACACAAATGGAGAAAGATAGGCGTTTGGAACAGATACTCAGATCCCAAGAACGAGGTTCTAAGGTCATAATATTTTGTTCCACAAAGAGGTTATGTGATCAGCTTGCTCGTAGCATTGGCCGCAATTTTGGGGCTGCTGCAATTCATGGAGATAAGTCTCAAGGTGAGAGAGATTGGGTTTTAAATCAGTTCCGAACAGGGAAGTCACCAATTCTGGTTGCCACTGATGTTGCTGCACGAGGGCTGGACATTAAGGATATAAGGGTGGTGATCAACTATGATTTCCCCACAGGGGTTGAGGATTATGTTCACCGAATTGGACGAACTGGAAGGGCTGGTGCTACTGGACTGTCGTACACCTTCTTCTCTGAGCAGGATTGGAAGCATGCAGGTGATTTGATCAAGGTTCTGGAGGGTGCCAACCAGCATGTTCCTCCTGAGTTACGACAGATGACTTTACGTGGACCATCAAACTTTGCAAAGGATCGGAGTGGGATGAATCGTTTTGATTCAGGCGGTCCAGCTGCTGGCCGCTGGGATACTGGCAGGTTCAGCGGTCGTGGTGGGATGAGGGATGGCGGGTTCGGCAGTCGTGGGGGCACGAGGGATGGCAGGTTTGGTGGTCGCAGTGGCACAAGGGATGGTGGGTTCAGTGGTCGCGGGGGCATGAGGGATGGTGCCAGTGTGCATGGGGGGAGAGGTAATTTCTTTTCTGGTAGAGGCAACAGGGCTAGGGGTTTTGGTGGCCCTCGAGGTGGCAATGTTGGTTGGGATCGAAGTGAACGTGGCCCACATGATCGGTACAACATGGATGGACGAGGGCGTGGACGTGGAAGATTTGATAATAGAAGAGATATAGCTCCCAGGAGTAGAGGAAGAAGTTATAGTCGTAGCCCTGAAAAAGTGCGGACTTGGGATTATAGCAGTAGTCGTAGTAGAAGTAGGAGCAGTAGTAGAAGTAGGAGTTGGAGCAGGGGCCGCAGCCGAAGCCGCAGTTGGTCCCGTGGTCGTAGTCGCAGCCGTAGCCGCAGCCGTGGTCGTAGAAGTCGAAGTTACAGCCGCAGCGGCAGTCGTAGCTGCAGCTATGATAGACGTGATAGGTCAGATGTACAGACCTCTGCCCGGGAGGATACCAGGGCTACTGAAGTTGAAGCTTCTGAACCAAGAATGTCTCCAACCACGCTAGGCAATTCAATTTTTGAAACCAAACATGCCGAGCAGCCACGAGCTGTTGGGGGTACTGAGCCAGTGAATCCAGAGGCTGCTGCCGACCTTCGCCATCAATCAGCTTCTGACATTTGA 3465 0.4874 MATAEAAPAALGPRYAPDDPTLAKPWKGLIDGSTGVLYYWNPETNITQYEKPATLPPPLPAGPPPVASMPEQDPIPAGHSMPPSGMAAQQVQKLLQGSQFQGQQVINQPQQHGQAMPQQQSPLLAQVTQQQQSSHVAQAAGQQQNTQPIQSMPQPGLQQVRQPMMQPQGQQMAQPSSLQMHHQMPQQVIQSQHFGQGTSQDHGSHIVQPQAHQFPHHTFHFMSYQQNMLSAGLQNPQQTQHNMHSQPYENQREFKPALPKIEEGDFKNASQVGLSPSQYQPKGAMSVQNNQNIPAGISSVQVPQVAVNAGQLPQFGSMSGSVQQSPSAMQSQQGSSDFVYQHGPNFQNQMGPGMMLGQPSNAPPVGLKAGRDDNLHGRAGNEHYNNSSKEIPAMGPQQPNIAPIPISRNQQNMRISNAPFPNAMPGGNGLSGIPGHSLHNMFSPPTGVPPPLSSNSLFRPPFIKSSDVTDLSPTEIYCQQHEVTATGDNVPPPFMTFDAAGFPPEILREMYSAGFSSPTPIQAQTWPVALQGRDIVATAKTGSGKTLGYIIPAFILLRQRRNNPLNGPTVLVLAPTRELATQIQDEAIKFGRSSRVSCTCLYGGASKALQLKELDRGADIVVATPGRLNDILEMKKIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGSVDELAANKAITQYVEIVTQMEKDRRLEQILRSQERGSKVIIFCSTKRLCDQLARSIGRNFGAAAIHGDKSQGERDWVLNQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGLSYTFFSEQDWKHAGDLIKVLEGANQHVPPELRQMTLRGPSNFAKDRSGMNRFDSGGPAAGRWDTGRFSGRGGMRDGGFGSRGGTRDGRFGGRSGTRDGGFSGRGGMRDGASVHGGRGNFFSGRGNRARGFGGPRGGNVGWDRSERGPHDRYNMDGRGRGRGRFDNRRDIAPRSRGRSYSRSPEKVRTWDYSSSRSRSRSSSRSRSWSRGRSRSRSWSRGRSRSRSRSRGRRSRSYSRSGSRSCSYDRRDRSDVQTSAREDTRATEVEASEPRMSPTTLGNSIFETKHAEQPRAVGGTEPVNPEAAADLRHQSASDI 1154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01023 1154 SMART ultradead3 514 717 IPR014001 -
Bach5g01023 1154 Gene3D - 705 875 IPR027417 -
Bach5g01023 1154 SMART helicmild6 750 834 IPR001650 -
Bach5g01023 1154 MobiDBLite consensus disorder prediction 1108 1122 - -
Bach5g01023 1154 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 566 849 IPR027417 -
Bach5g01023 1154 MobiDBLite consensus disorder prediction 880 1154 - -
Bach5g01023 1154 CDD SF2_C_DEAD 714 843 - -
Bach5g01023 1154 MobiDBLite consensus disorder prediction 1 24 - -
Bach5g01023 1154 SMART ww_5 21 54 IPR001202 GO:0005515
Bach5g01023 1154 MobiDBLite consensus disorder prediction 979 1029 - -
Bach5g01023 1154 MobiDBLite consensus disorder prediction 49 91 - -
Bach5g01023 1154 MobiDBLite consensus disorder prediction 378 454 - -
Bach5g01023 1154 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 495 523 IPR014014 GO:0003724
Bach5g01023 1154 MobiDBLite consensus disorder prediction 402 418 - -
Bach5g01023 1154 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 526 700 IPR014001 -
Bach5g01023 1154 MobiDBLite consensus disorder prediction 1039 1073 - -
Bach5g01023 1154 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 466 873 - -
Bach5g01023 1154 FunFam ATP-dependent RNA helicase RhlB 704 876 - -
Bach5g01023 1154 MobiDBLite consensus disorder prediction 53 71 - -
Bach5g01023 1154 Pfam DEAD/DEAH box helicase 519 689 IPR011545 GO:0003676|GO:0005524
Bach5g01023 1154 Gene3D - 471 704 IPR027417 -
Bach5g01023 1154 MobiDBLite consensus disorder prediction 380 394 - -
Bach5g01023 1154 Pfam Helicase conserved C-terminal domain 726 834 IPR001650 -
Bach5g01023 1154 SUPERFAMILY WW domain 14 54 IPR036020 GO:0005515
Bach5g01023 1154 FunFam probable ATP-dependent RNA helicase DDX17 462 703 - -
Bach5g01023 1154 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 729 873 IPR001650 -
Bach5g01023 1154 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 646 654 IPR000629 -
Bach5g01023 1154 MobiDBLite consensus disorder prediction 105 204 - -
Bach5g01023 1154 MobiDBLite consensus disorder prediction 1080 1105 - -
Bach5g01023 1154 ProSiteProfiles WW/rsp5/WWP domain profile. 20 54 IPR001202 GO:0005515
Bach5g01023 1154 ProSitePatterns WW/rsp5/WWP domain signature. 26 52 IPR001202 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01023 Bach-Chr5 7213175 7218782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01023 483 881 Eukaryotic Initiation Factors Gene Family AT3G19760 33.750 5.40e-67 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01023 K12823 - gmx:100807830 1407.51