Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01004 ATGAACAAGGCCCTTGTAGGAGGAGTCTCCATTATTCTTGTTGTGGGTGTAGTTGTTGGTCTCATAGCTGGTGTAACCCGCAGCGGGTCTAATGGGTCTGAAGGACAAATTTCCACAACCACAAGAACTGTTGCTGCTATGTGCAACATGACCGATTACCAGAAGCAATGTGTTCAAAGCATGAGCAGTGTGGCTGACAACAAAACTGCCACAGTCAAGGACTACATCCAAGCTGCCATTGACTACACCATTACACAGGTTGAAGCAGCAATGAACAAATCGCAAGGCCTAGGCAGGGATGGGTTGAACTCAACAGATAAAATGGGGTTGGATGATTGCAAGGATTTGTTGGAGTATGCCATTGATGAGCTGCAAGCATCAGTTTCAATGGTGGGTGATAGCCAATTGCATACCCTGGCCGATAGAGAAGCAGAGCTAAAAAATTGGCTGAGTGCTGTGATATCATACCAGCAAACTTGCCTTGATGGGGTGGAGCAATCTGATGTAAAAAAACAACTGAACAATGGGCTTCTCAATGCCACTGAACTAACAAGCAATGCCTTGGCCATTGTTTCTGCCATTTCTGAAATCTTGACCTCTTATAATATCACATTCAGCACCAATACCAGCGCGACCTCTCGGAGGTTGCTGGAAGCGGAGGGGAGCAAAGGGGAATTCCCTTCATGGGTATCAGCTTCTGATAGGAAGCTACTGGCAAGCCAAGCTAGAGTGCAGCCTAATGCAGTGGTGGCAAAAGATGGGAGTGGACAATATGATACCATCACTGCGGCTCTTAATGCATACCCCAAACAACTCACAGGGAGATATGTTATTTATGTGAAGGCTGGTGTGTATGATGAGTACATTACTGTCACAAAGAAGCAAACTAATGTGTTTATGTATGGAGATGGGCCTGAGAAAACCATAGTCACTGGAAGCAAAAGCTTTCAAGGCGGTGTCTCCACTTTTAAGACTGCTCCCTTTGCTGTTGTTGGGTTTGATTTCATGGCCAAGGACATGGGATTCAGGAACACAGCAGGGCCTGAAGGACACCAAGCCGTGGCTCTTCGAGTTCAATCAGATAGATCATCCTTCTATAACTGCAGAATGGAAGGTTACCAAGACACATTATACGTCCAAGCACATCGTCAATTCTACCGCAACTGTGTCATCTTGGGCACTGTAGACTTCATCTTTGGCGATGCCACAGCAGTCATCCAAAGCTCCCAATTGATTGTCAGAAAGCCAATGGCAAACCAGCAGAACATGGTAACAGCTCATGGTAGAGTGGAAAGACGTGAGACTACTGGTCTTGTTATCCAGAATTGCAGGATTATGCCTGATCAAACACTCTTCCCTACAAGGTTGCAGACAAAATCTTACTTGGGTAGACCATGGAAGGCTTATTCAAGGACTATTATTATGGAAAGTACCATTGACGACTTTATTCAACCTGAGGGCTGGATGCCCTGGAGTGGTACTCTCTATCTTGACACATTAGATTATAGAGAGTATGCAAATCGCGGTCCTGGAGCTGCAACTAATAGAAGGGTCAACTGGAGGGGTTACAAGGTCATAACAGACAGAAATGAGGCAACACAATTCACTCCAGGGCCATTTCTGCAAGCAAATGACTGGCTACCTCCAACTGGTGTGCCATTTTACCTTGGCTTCACTGATGCTAAGGATATGTTGTGA 1698 0.4564 MNKALVGGVSIILVVGVVVGLIAGVTRSGSNGSEGQISTTTRTVAAMCNMTDYQKQCVQSMSSVADNKTATVKDYIQAAIDYTITQVEAAMNKSQGLGRDGLNSTDKMGLDDCKDLLEYAIDELQASVSMVGDSQLHTLADREAELKNWLSAVISYQQTCLDGVEQSDVKKQLNNGLLNATELTSNALAIVSAISEILTSYNITFSTNTSATSRRLLEAEGSKGEFPSWVSASDRKLLASQARVQPNAVVAKDGSGQYDTITAALNAYPKQLTGRYVIYVKAGVYDEYITVTKKQTNVFMYGDGPEKTIVTGSKSFQGGVSTFKTAPFAVVGFDFMAKDMGFRNTAGPEGHQAVALRVQSDRSSFYNCRMEGYQDTLYVQAHRQFYRNCVILGTVDFIFGDATAVIQSSQLIVRKPMANQQNMVTAHGRVERRETTGLVIQNCRIMPDQTLFPTRLQTKSYLGRPWKAYSRTIIMESTIDDFIQPEGWMPWSGTLYLDTLDYREYANRGPGAATNRRVNWRGYKVITDRNEATQFTPGPFLQANDWLPPTGVPFYLGFTDAKDML 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01004 565 CDD PMEI-like_3 46 195 - -
Bach5g01004 565 PANTHER PECTINESTERASE 16 548 - -
Bach5g01004 565 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 44 194 IPR035513 -
Bach5g01004 565 Gene3D - 241 558 IPR012334 -
Bach5g01004 565 ProSitePatterns Pectinesterase signature 2. 391 400 IPR033131 -
Bach5g01004 565 FunFam Pectinesterase 40 195 - -
Bach5g01004 565 Pfam Pectinesterase 247 543 IPR000070 GO:0030599|GO:0042545
Bach5g01004 565 NCBIfam pectinesterase inhibitor domain 37 192 IPR006501 GO:0004857
Bach5g01004 565 FunFam Pectinesterase 241 558 - -
Bach5g01004 565 SMART PMEI_2 39 190 IPR006501 GO:0004857
Bach5g01004 565 Gene3D Invertase/pectin methylesterase inhibitor family protein 41 195 IPR035513 -
Bach5g01004 565 Pfam Plant invertase/pectin methylesterase inhibitor 43 190 IPR006501 GO:0004857
Bach5g01004 565 SUPERFAMILY Pectin lyase-like 244 557 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01004 Bach-Chr5 7093476 7095261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01004 5 558 Carbohydrate Esterase AT3G05610 43.416 1.28e-167 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01004 K01051 - qsu:111997763 744.191