Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g01000 ATGCATCCAAGACTTAATGGTGTTGAAGATGAAGAGGAAAGCTATTCCTATGCTATGCAGCTAGCGAGGTCAATAGCGCTTCCCATGGTCTTGCAAACGGTTATTGAGCTCAAGGTGTTTGATATAATTGCTCAATCAGGTCCAGATGCCAAGCTCTCTGCAATTGACATTGCTGCCCAGATTACTAACAAGAACCCAGAAGCAGCCTCAATGTTAGACCGTATCTTCAGGCTCCTAGCCTCTCACTCTGTGCTTCATTGCTCTCTTGTTGAAGATCAACAAAAGCTTGGTTCTTTTCAGAGACTTTACAGCCTAAACTCTCTGTCTAAATATTTTGTGTCTGATGATCATGGGATATCACTGGGGAACTACACACCCATGGTTCAGGACAAGGTCTTCTTAGACAGTTGGTCCCAATTGAAAGAGGCAGTTGTAGAAGGGGGTGTTCCATTCAACAGAGCTCATGGCTGCCATGCCTTTGAATACCCAGGCTTGGATGCCAGGTTTAATAAAGTTTTCAACACTGCAATGATCAATCATACCACCATAGTTATGAAGAAGATTCTTGAAATCTATGATGGTTTTGAGGGTATCAATTCACTGGTGGATGTTGGTGGGGGTCTTGGGATCACCCTTAACTTGATCATTTCCAAACACCAACATATTCATGGTATAAATTTCGATTTGTCTCATGTCATACAACATGCCCCTCCCTATCCTGGTGTGGAGCATGTTGAAGGAGACATGTTTGAAAGTGTGCCTAAAGGAGATGCCATTTTTATGAAGTGGATACTTCATGATTGGAGTGATGAAAAGTGCTTGAAAGTGTTGAAGAACTGCTATGATTCTATTCCTCAAGATGGAAAGGTGATTGTTGTGGAGGCAGTGGTTCCAGTGTTACCAGAGACTAGTGCTACTGCAAAGAGCATCTCCTTACTTGACGTTCAAATGATGACTCAAAATCCAGGTGGAAAAGAGCGAACTGAACAAGAATTCATGGAATTAGCAACAACGGCTGGATTTAGTGGCATTAGATATGAATGCTATGTTACTAACTTTTGGGTTATGGAATTCTTCAAGTAG 1083 0.4201 MHPRLNGVEDEEESYSYAMQLARSIALPMVLQTVIELKVFDIIAQSGPDAKLSAIDIAAQITNKNPEAASMLDRIFRLLASHSVLHCSLVEDQQKLGSFQRLYSLNSLSKYFVSDDHGISLGNYTPMVQDKVFLDSWSQLKEAVVEGGVPFNRAHGCHAFEYPGLDARFNKVFNTAMINHTTIVMKKILEIYDGFEGINSLVDVGGGLGITLNLIISKHQHIHGINFDLSHVIQHAPPYPGVEHVEGDMFESVPKGDAIFMKWILHDWSDEKCLKVLKNCYDSIPQDGKVIVVEAVVPVLPETSATAKSISLLDVQMMTQNPGGKERTEQEFMELATTAGFSGIRYECYVTNFWVMEFFK 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g01000 360 PIRSF O-mtase 3 360 IPR016461 GO:0008168
Bach5g01000 360 Gene3D Vaccinia Virus protein VP39 113 360 IPR029063 -
Bach5g01000 360 PANTHER O-METHYLTRANSFERASE 18 345 IPR016461 GO:0008168
Bach5g01000 360 Pfam O-methyltransferase domain 137 342 IPR001077 GO:0008171
Bach5g01000 360 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 19 360 IPR016461 GO:0008168
Bach5g01000 360 SUPERFAMILY "Winged helix" DNA-binding domain 10 115 IPR036390 -
Bach5g01000 360 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 119 358 IPR029063 -
Bach5g01000 360 Pfam Dimerisation domain 29 80 IPR012967 GO:0046983
Bach5g01000 360 FunFam Caffeic acid 3-O-methyltransferase 2 112 - -
Bach5g01000 360 Gene3D - 4 112 IPR036388 -
Bach5g01000 360 FunFam Caffeic acid O-methyltransferase 113 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g01000 Bach-Chr5 7077249 7078704 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g01000 11 360 Monolignol Biosynthesis Gene Families AT5G54160 52.841 2.64e-138 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g01000 K13066 - cave:132187356 493.041