Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00995 ATGGAAGTGGATGACTGGGACTTGAGCGCCGAGGACCTAGATTCCCTCGAAAGAGATGCTTTCGAGAAGATTGCTCAACTTCGCAACTCTTCTTGCTCTTCTTCATCTGCCACTACCTCTGCGTCCGTTCCTTCTATTTCGACTCCTTATAGGAATTATCAACAATCAAATGTACAGCAACAGCACCCTACGCTACCTCGTAGCAGCCCCTTAGAACAATCCCCAGAAAAACCCATTTCTGATTCTCGTTCTGAAAGAGTTGAAGCTTTGTCTCCTAGGGCCAGAGTATTACCCACTTCATTTAGTTCAGGAACAAACAAAGATGAACATTCAAAAGAACCGCCAAAGCTTTCGGTTAGATTTTTTCTTCATTCCTGTGGAAACATTGCAGCAAAATTTCCGTATGACCAGGTTGTAGTAGCCGCCTTCAGAAGAATCCCTAAATCTACTTGGAATGGAAAAGAAAGGTTATGGATGTTCCCACTATCTTCTTTGTCAGCTGCAGAAAAGGTTCTTGGTGAAATATCTGGTTATAATGTTCAGGTGGAGAACCTAGATCCCTTAGTGCATCGGGCCATTACTGCTGCGTCTGCTGTTCCAGATTTACAGGATCGATATGATAGTATCCCCAGCTATATTGAATCAAAGCTTTTGCCTTTTCAGCGAGAAGGTGTTAGGTTTGTATTGCAGCATGGAGGGCGTGCTCTTCTGGCAGATGAAATGGGACTGGGGAAAACTTTGCAGGCAATTGATTCTTTACATAAACCATTTCCATTCCTTCAGTTTAATCTAATGCTTAGAACTTATCTGTGTATAGCTTCTTGTGTTCGTGATTCATGGCCTGTTCTCATACTTACACCATCTTCATTACGTTTGCAATGGGCTTCTATGATTCAACAATGGCTGAATATTCCTTCATCTGATATACTTGTTGTCTTATCTCAAAGTGGTGGATCAAATAGAGGAGGTTTCACCATAGTATCATCAAATACCAAAAGCAGCATTCGTCTGGATGGGCTATTCAATATCATCTCATATGATGTGGTCACAAAGATACAGAATATGCTAATGACATTGGACTTTAAGGTTGTGATTGCAGATGAATCACATTTTCTGAAAAATGCTCAAGCAAAGAGGACTACTGCTTCTCTTCCAGTTATAAAGAAAGCTCAATATGCCATCTTGCTTAGTGGAACTCCTGCTTTATCCCGACCAATTGAATTATTCAAGCAGCTGGAAGCATTGTATCCTGATGTATATAAGAATGTTCATGAATATGGTAACCGGTATTGCAAGGGTGGAGTTTTTGGAGTTTATCAAGGTGCAAGTAACCATGAAGAATTACACAATTTGATGAAGGCGACAGTGATGATTCGTAGGCTTAAAAAGGACGTTCTTTCACAACTTCCTGTAAAGCGTAGGCAACAGGTCTTCCTAGATTTGGCTGACAAGGATATGAAGCACATCAATGCTTTATTTCGTGAGTTGGAGGTGGTAAAAGCCAAAATTAACATGTGCAAATCAAAAGAAGATGCTGAATCACTAAAGTTTACTCAAAAGAATCTTATCAACAAGATATATACTGATTCTGCAGAAGCCAAGATCCCTGCAGTTCTTGATTATGTTGGAACTGTCATTGAGGCAGGTTGCAAGTTTCTTATATTTGCACACCATCAACCGATGATAGATGCAATACATGAGTTTCTTCTTAAGAAAAAAGTCGGTTGCATCCGGATTGATGGCCGTACACCCCCTGCTTCAAGGCAAGCATTGGTTACAGAGTTTCAGGAAAAAGAATCTATTAAGGCAGCAGTGCTGTCTATCAAAGCTGGTGGAGTTGGGTTGACTTTAACTGCTGCAAGCACAGTCATCTTTTCAGAATTGTCTTGGACACCTGGTGATCTTATTCAAGCTGAAGACCGTGCTCACAGAATTGGCCAGGTGTCTTCAGTAAATATCTATTACTTGCTTGCAAATGACACAGTTGATGATATCATATGGGATGTAGTGCAGAGCAAATTAGAAAATCTGGGACAGATGTTAGATGGGCATGAGAAGACGTTGGAGGTTTCAGCTAGTCAGCCACGAAATAGCCCTTCAAAGCAGAAAACACTAGACTCTTATATAAGAAAATGTAACAGCACGGATGGCCAAGAATATCAGTCGGACTCCAAACGCCCCCGCCACTGA 2190 0.4114 MEVDDWDLSAEDLDSLERDAFEKIAQLRNSSCSSSSATTSASVPSISTPYRNYQQSNVQQQHPTLPRSSPLEQSPEKPISDSRSERVEALSPRARVLPTSFSSGTNKDEHSKEPPKLSVRFFLHSCGNIAAKFPYDQVVVAAFRRIPKSTWNGKERLWMFPLSSLSAAEKVLGEISGYNVQVENLDPLVHRAITAASAVPDLQDRYDSIPSYIESKLLPFQREGVRFVLQHGGRALLADEMGLGKTLQAIDSLHKPFPFLQFNLMLRTYLCIASCVRDSWPVLILTPSSLRLQWASMIQQWLNIPSSDILVVLSQSGGSNRGGFTIVSSNTKSSIRLDGLFNIISYDVVTKIQNMLMTLDFKVVIADESHFLKNAQAKRTTASLPVIKKAQYAILLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGVYQGASNHEELHNLMKATVMIRRLKKDVLSQLPVKRRQQVFLDLADKDMKHINALFRELEVVKAKINMCKSKEDAESLKFTQKNLINKIYTDSAEAKIPAVLDYVGTVIEAGCKFLIFAHHQPMIDAIHEFLLKKKVGCIRIDGRTPPASRQALVTEFQEKESIKAAVLSIKAGGVGLTLTAASTVIFSELSWTPGDLIQAEDRAHRIGQVSSVNIYYLLANDTVDDIIWDVVQSKLENLGQMLDGHEKTLEVSASQPRNSPSKQKTLDSYIRKCNSTDGQEYQSDSKRPRH 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00995 729 CDD SF2_C_SNF 533 657 - -
Bach5g00995 729 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 211 471 IPR027417 -
Bach5g00995 729 SMART ultradead3 213 426 IPR014001 -
Bach5g00995 729 MobiDBLite consensus disorder prediction 690 707 - -
Bach5g00995 729 Pfam Helicase conserved C-terminal domain 545 646 IPR001650 -
Bach5g00995 729 Gene3D - 191 466 IPR038718 -
Bach5g00995 729 ProSiteProfiles HARP domain profile. 113 187 IPR010003 -
Bach5g00995 729 SMART helicmild6 563 646 IPR001650 -
Bach5g00995 729 Pfam SNF2-related domain 235 514 IPR000330 GO:0005524|GO:0140658
Bach5g00995 729 Gene3D - 503 725 IPR027417 -
Bach5g00995 729 MobiDBLite consensus disorder prediction 27 90 - -
Bach5g00995 729 PANTHER DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER 4 718 - -
Bach5g00995 729 MobiDBLite consensus disorder prediction 95 114 - -
Bach5g00995 729 CDD DEXHc_HARP_SMARCAL1 217 460 - -
Bach5g00995 729 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 226 418 IPR014001 -
Bach5g00995 729 MobiDBLite consensus disorder prediction 27 77 - -
Bach5g00995 729 MobiDBLite consensus disorder prediction 688 707 - -
Bach5g00995 729 FunFam Chromatin remodeling factor18 266 484 - -
Bach5g00995 729 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 360 689 IPR027417 -
Bach5g00995 729 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 538 689 IPR001650 -
Bach5g00995 729 FunFam Chromatin remodeling factor18 495 725 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00995 Bach-Chr5 7036367 7044366 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00995 517 677 RAD5 or RAD16-like Gene Family AT1G02670 31.515 4.43e-17 83.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Bach5g00995 SNF2_N 1.2e-28 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00995 K14440 - gmx:100797654 1114.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00995 5 7036367 7044366 Bach5g00995 5 7036367 7044366 ECH