Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00973 ATGGCATTTCAGGATTTCGATCTCATATCGGAACGGCGTAAAGCTGAGAGGAAACAGAAGCTGAGGAAGAGGATCTTGATTGGCGTAATCGCCACCATTGTCCTTGCCGGTCTAATAGCCGCCGCAGTTTTCGTGGTTGTCTCGAAAACTGACAATGGCCGCAAGGATCACAAAGCATCTCCATCTGCCCCTTCCGTTGGCGACAAACAGATATCGCGTGGGGAGAAGATGGTGAAAGCTATGTGCAGCACCACCGATTACAAGAGCAAATGCGAGAGCTCCCTCGGCGATGCCGTGAAATCTGATCCTAAATTGAACCAACCGAAGGATCTTCTTGAGGTTGCCATCAAGGCTGCAGAGAAAGAGCTCGGTAAGGCCTTCGACAAAATCAAATCCATGAAATTTGAATCTGAGAAAGACAAAGGCGCGTTTGAAGATTGCCAGCAACTCATCGATGATGCCAAAGAGGAACTGGGATTGTCTCGTACGGAAGTGGACAAAAATGAATTGAAAAAGCTTGTGAACAAAACTGATGATGTGAGCAATTGGCTGAGTGCAGTCATGTCTTACCATGAAACCTGCATTGATGGATTCCCTGATGGAAAATTGAAGACAAATGTTGAGAGTACCTTCAAGGATTCCAAGGAATTTGTTAGCAACGCTCTTGCTATCATGTCGGATGTCACTTCATTGCTTTCCGCATTCCAATCGGTGACAGCCAGCACTGCTCGTCACTTGCTGGAACACAAGACCAACTCCCCAGCTAATGCTTTGGGAAAGGATGGGCTTCCTGATTGGATGAGCCACGACGAACGAAGGGTGTTGAAAGCAGCGGATGACAAGCCCACACCTAATGTCACCGTGGCCAAAGATGGCAGTGGACAGTTCAAAACCATCTCTGAAGCTTTAGCAGCCATCCCTGAAAAATATGAAGGAAGATATGTAGTGTACGTTAAAGAAGGCGTATATGAGGAAACTGTAACAGTGACAAAGAAAATGGTAAATGTAACCGTGTATGGTGATGGATCACAGAAGAGCATCGTCACCGGCAGCAAAAACTTTGTTGATGGTGTCAGAACTTTCCAAACTGCAACCTTTGACCCTCGCAGCGCCACATCTGATCTCAGAGGCCTTGCTGAGATTGCATTAACTCAAAGTAAGGCTTATGGAGACCAAACGCTGTCGTATGTTAACGAGCTGACATCTTCAGCTGCCAATGGCAGTGACGCCAATAGATACATGAACAATTGCTTGAGTGACTGCTTCGAGGAATACAAGGAAGCCATAGAGAATTTGGAGGATTCAGAAGAAGCACTTGGCAGTGAAGACTATGAGAGAGTGGATGTTTTTGTCTCGGCAGCTATGACAGATGCTGAGACATGCGGAGATGGCTTCAAGGAATTGCTGGGTAGTGGTGATGATAATAATAATAGCACCTTTCCTCTCACTCAGCGCAATCGTTGTTTCTCTGAGCTGTGTAGTAATTTTCTCGCCATTATGAAACTTTTGGTTTGA 1515 0.4601 MAFQDFDLISERRKAERKQKLRKRILIGVIATIVLAGLIAAAVFVVVSKTDNGRKDHKASPSAPSVGDKQISRGEKMVKAMCSTTDYKSKCESSLGDAVKSDPKLNQPKDLLEVAIKAAEKELGKAFDKIKSMKFESEKDKGAFEDCQQLIDDAKEELGLSRTEVDKNELKKLVNKTDDVSNWLSAVMSYHETCIDGFPDGKLKTNVESTFKDSKEFVSNALAIMSDVTSLLSAFQSVTASTARHLLEHKTNSPANALGKDGLPDWMSHDERRVLKAADDKPTPNVTVAKDGSGQFKTISEALAAIPEKYEGRYVVYVKEGVYEETVTVTKKMVNVTVYGDGSQKSIVTGSKNFVDGVRTFQTATFDPRSATSDLRGLAEIALTQSKAYGDQTLSYVNELTSSAANGSDANRYMNNCLSDCFEEYKEAIENLEDSEEALGSEDYERVDVFVSAAMTDAETCGDGFKELLGSGDDNNNSTFPLTQRNRCFSELCSNFLAIMKLLV 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00973 504 CDD PMEI-like_3 80 226 - -
Bach5g00973 504 Gene3D Invertase/pectin methylesterase inhibitor family protein 74 230 IPR035513 -
Bach5g00973 504 Pfam Pectinesterase 285 367 IPR000070 GO:0030599|GO:0042545
Bach5g00973 504 NCBIfam pectinesterase inhibitor domain 73 226 IPR006501 GO:0004857
Bach5g00973 504 NCBIfam pectinesterase inhibitor domain 361 503 IPR006501 GO:0004857
Bach5g00973 504 PANTHER PECTINESTERASE 395 501 - -
Bach5g00973 504 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 365 503 IPR035513 -
Bach5g00973 504 Pfam Plant invertase/pectin methylesterase inhibitor 77 224 IPR006501 GO:0004857
Bach5g00973 504 Pfam Plant invertase/pectin methylesterase inhibitor 363 499 IPR006501 GO:0004857
Bach5g00973 504 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 76 227 IPR035513 -
Bach5g00973 504 FunFam Pectinesterase 74 229 - -
Bach5g00973 504 Gene3D Invertase/pectin methylesterase inhibitor family protein 360 504 IPR035513 -
Bach5g00973 504 Coils Coil 415 442 - -
Bach5g00973 504 SMART PMEI_2 73 224 IPR006501 GO:0004857
Bach5g00973 504 SMART PMEI_2 350 499 IPR006501 GO:0004857
Bach5g00973 504 SUPERFAMILY Pectin lyase-like 283 370 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00973 Bach-Chr5 6903600 6908590 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00973 1 366 Carbohydrate Esterase AT2G26450 40.704 1.02e-91 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00973 - - qsa:O6P43_003780 414.461