Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00950 ATGGCGACGAAGAAAAGCGAGAAGCTTTATAAAGAAGTGAAGGATAAGAAGAATAAGAAGGGTGCTGCTATGAACAATGAAAGCGAAGAAGGCAACGTTTTTGCTTCTTGCTCTTTCTCCAGTCTAGGCCTCCACCCTACCTTATGCGACCAGCTCCGAGAAAGGATGGGATTTGAAGTTCCAACCTTGGTGCAAGCTCAAGCTATTCCCGTTATTCTCTCTGGGCGTCATGTACTTGTTAATGCTGCCACTGGCACCGGGAAGACTGTTGCATACTTGGCTCCAATTATTCACCATTTGCAGAATTTTGATAATCGGATTGACCGGTCTGATGGAACATTTGCGTCCTCTGTCCTGCATGTCCTTTCCATGAAAATAATGGAGCAACTCATCGACTTAAATTGTGTGTGGAAGCAGGATATTTCATTCTTGCCACAACTGCTTCATTCCATATTTACTACAGAATTAATTGATTTATTTGCAATAGCGTTGGTTCTTGTACCAACGCGTGAGCTATGTTTGCAGGTTTACGAAATTCTTCAGAAATTACTGCACCGATTTCACTGGATTGTACCTGGTTACATTATGGGTGGCGAAAATAGATCAAAGGAGAAAGCCAGGCTGCGCAAAGGCATATCTATTCTTGTAGCAACTCCTGGGCGCCTTTTGGACCACTTGAAGAATACATCATCATTCTTGTACTCAAAGTTATGCTGGATAATCTTTGATGAAGCTGATCGGATCTTGGAATTAGGATTTGGAAAAGAAATAGAGGAAATACTAGATCATTTAGGTACAAGAAAAACTGAGAATACAGCATCAAAACACTCGGAAGTTTCAAGACAAAATTTGCTATTATCAGCCACCTTAAATGATAAAGTGAACCACCTTGCAAAAATTAGTCTTGAGAATCCAGTGACCATTGGTCTTGATGACAAAAGAACTGAAACAATGTCAAAAATTAAAAGCCTTAGTCCTTCAGAATCTGATGAAGACAATGAAGACCAGTATCCCAGTAAAATACTAAGCTCTTCAATTGAAGATTATAAAGTTCCTACACAATTGGTTCAGAGATATGTGAAAGTACCTTGTGGATCACGGCTACCTGCACTTCTCTCCATTCTGAAGTATCTTTTTGAAAGGGAAACCTCCCAAAAGATTGTGGTATTCTTTTCAACATGTGATGCTGTGGACTTCCACTATTCTCTGTTAAATGAGTTCCAATTCTCATTTTATCCACAAACAGAAGCAGAAAACAAACAGATCTTTCTTGGATGCAAAACTTTTCGGTTGCATGGGAATATGGAACAAGAGGATCGGAGAACCACTTTTCAGTCCTTTAAAACGGCGAAGTCAGCTCTGCTGTTGTCCACTGATATTTCTGCTAGAGGATTAGATTTTCCGAAAGTTAGGTGCATTGTACAGTATGATTCTCCTGGGGAAGCTACTGAATACGTGCATAGAGTTGGTAGAACTGCTCGGATGGGTGAAAGAGGAGAGTCTTTGTTATTTCTGCAACCAGTTGAAGTAGATTATTTACAAGACTTGGAAAAGCATGGTGTATCACTAACAGAGTTTCCTCTTCTCAAAGTATTTGATAGTTTCCCACTTTATGGTCAAAAGAACCATATTAAGAAGTTTGTTTCTATAGAGTCACATCCTTGGGTGCTTTGCCTCCAGAAGGCACTCGAATCTTTCATCATGTCCAAGCCCAAGATGGACAAACTTGCCAAGAAGGGATTTTGCTCTTGGGTCCGTGCATATACAGCCCATCGTGGCGACCTTAAGAGAATATTTATGATCAAGAAACTTCACTTAGGACATGTAGCCAAAAGTTTTGCATTAAAACAACAACCCTCCTTAGTTGGAAAATCATATGGGAAGCAAACTAAGAAGAGGAAGAGATTTCACAAGCAAACTGAGCTGTCCAAAAAGAGAAAGGTTACCAGTGTGACTTAG 1959 0.4012 MATKKSEKLYKEVKDKKNKKGAAMNNESEEGNVFASCSFSSLGLHPTLCDQLRERMGFEVPTLVQAQAIPVILSGRHVLVNAATGTGKTVAYLAPIIHHLQNFDNRIDRSDGTFASSVLHVLSMKIMEQLIDLNCVWKQDISFLPQLLHSIFTTELIDLFAIALVLVPTRELCLQVYEILQKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSKLCWIIFDEADRILELGFGKEIEEILDHLGTRKTENTASKHSEVSRQNLLLSATLNDKVNHLAKISLENPVTIGLDDKRTETMSKIKSLSPSESDEDNEDQYPSKILSSSIEDYKVPTQLVQRYVKVPCGSRLPALLSILKYLFERETSQKIVVFFSTCDAVDFHYSLLNEFQFSFYPQTEAENKQIFLGCKTFRLHGNMEQEDRRTTFQSFKTAKSALLLSTDISARGLDFPKVRCIVQYDSPGEATEYVHRVGRTARMGERGESLLFLQPVEVDYLQDLEKHGVSLTEFPLLKVFDSFPLYGQKNHIKKFVSIESHPWVLCLQKALESFIMSKPKMDKLAKKGFCSWVRAYTAHRGDLKRIFMIKKLHLGHVAKSFALKQQPSLVGKSYGKQTKKRKRFHKQTELSKKRKVTSVT 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00950 652 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 69 308 IPR014001 -
Bach5g00950 652 SMART DUF4217_3 558 623 IPR025313 -
Bach5g00950 652 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 517 IPR027417 -
Bach5g00950 652 SMART ultradead3 57 324 IPR014001 -
Bach5g00950 652 Pfam DEAD/DEAH box helicase 63 296 IPR011545 GO:0003676|GO:0005524
Bach5g00950 652 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 241 249 IPR000629 -
Bach5g00950 652 Gene3D - 2 311 IPR027417 -
Bach5g00950 652 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 370 543 IPR001650 -
Bach5g00950 652 MobiDBLite consensus disorder prediction 1 24 - -
Bach5g00950 652 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 99 IPR027417 -
Bach5g00950 652 CDD SF2_C_DEAD 355 505 - -
Bach5g00950 652 Gene3D - 365 649 IPR027417 -
Bach5g00950 652 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 37 66 IPR014014 GO:0003724
Bach5g00950 652 Pfam Domain of unknown function (DUF4217) 560 620 IPR025313 -
Bach5g00950 652 Pfam Helicase conserved C-terminal domain 372 496 IPR001650 -
Bach5g00950 652 MobiDBLite consensus disorder prediction 627 642 - -
Bach5g00950 652 SMART helicmild6 413 496 IPR001650 -
Bach5g00950 652 PANTHER RNA HELICASE 16 611 - -
Bach5g00950 652 MobiDBLite consensus disorder prediction 1 25 - -
Bach5g00950 652 CDD DEADc_DDX31 48 309 - -
Bach5g00950 652 MobiDBLite consensus disorder prediction 624 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00950 Bach-Chr5 6706404 6710943 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00950 38 528 Eukaryotic Initiation Factors Gene Family AT3G19760 23.482 1.44e-26 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00950 K14806 - gmx:100805157 924.465