Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00949 ATGAAGGTTCCATCAAATGGTTACTTGCCTAATTCCGGCGAAGGAGAAAGGAAGGCCATTAATTCAGAGTTATGGCATGCATGTGCTGGGCCGTTGGTTTCTTTGCCTCCTGTTGGAAGTTTGGTGGTTTACTTCCCCCAAGGACACAGTGAGCAAGTTGCAGCGTCCATGCAAAAGGAGGCTGATTTAATACCTAGTTACCCTAACCTACCGTCCAAGTTGATTTGCATGCTTCACAATGTCGCGTTGCATGCTGATCCTGAAACTGACGAGGTTTATGCACAGATGACCCTTCAACCTGTAAATAAATATGACAAGGAAGCAATACTTGCGTCAGACATGGGTCTCAAGCAAAGTAGACAGCCTACTGAGTTCTTTTGCAAAACTCTTACAGCTAGTGACACAAGCACGCATGGTGGATTTTCTGTACCTCGTAGAGCAGCTGAGAAGATATTTCCACCTCTGGATTTTTCAATGCAACCCCCCGCACAGGAGATTGTTGCCAAAGATTTGCATGACAGTACATGGACATTCAGGCATATCTACCGCGGTCAACCGAAGAGGCATTTACTGACTACTGGCTGGAGTGTCTTTGTTAGCACAAAAAGACTGTTTGCTGGAGATTCTGTTCTTTTTATTAGAGATGAAAAACAGCAACTTCTGTTGGGTGTAAGGCGTGCTAATAGACAGCAGCCACCTCTCTCTTCTTCAGTCATATCCAGTGACAGCATGCATATTGGCATTCTTGCTGCTGCAGCTCATGCTGCTGCAAATAGCAGTCCCTTTACAATATTTTACAATCCAAGGGCCAGCCCCTCAGAATTTGTTATTCCATTGGCCAAGTATAATAAAGCAATGTACACTCAAGTTTCACTTGGAATGAGATTTAGGATGATGTTTGAGACTGAGGAATCAGGAGTACGCAGATACATGGGAACAATCACAGGTATAAGTGACTTGGATCCTGTGAGATGGAAAAACTCACAGTGGCGCAATCTTCAGATGCTTAATGATAAAATACGTTCATTTCCTGAGTTTTCTGTTTCATTTCATACGCATTATGGTTCTATGTCCAACAATGCAAATGTGCTTGATCCTCTGTTTCTGAGCTCTAAAGTTGGATGGGATGAATCCACTGCTGGTGATCGCCCAAGCAGAGTTTCAATTTGGGAAACTGAACCAGTAGTGACTCCTTTTTACATTTGTCCACCCCCGTTTTTTAGGCCCAAGTTCCCCAAGCAACCAGGAATGCCAGATGATGAGTCTGATATGGATAATACTTTCAAGAGAGCTATGCCCTGGCTAGGGGATGAGTTTGGCATGAAGGATGCGTCAAGTTCAATTTTTCCTGGTTTGAGTTTAGTGCAGTGGATGAGCATGCAGCAGAATAATCAATTTTCTGCTGCTCAACCAGGATTTTTCCCATCCATCCTTTCTTCTAATTCTCTGCATGGTAACCTTGGCACTGATGATCCATCCAAGTTGTTGAGTTTTCAAACCCCTGCCCTTTCTTCCCCAAATCTTCAATTTAACAAACCTAGTTTACAAAACCATGTCAACCAATTGCAACAGCCTCCTGCATCGTGGCCTCAGCAGCCACAGCTGCAGTCTTTGATGCAGACGCCCATAAACCAGCTCCAACAGCAGAGGCAGCCGCAACAACAGCAACTTACTGAACCACAGAACCTGCCACAGCAGCAGCAACTTCAACAACACCAGCCCCAACTGCATCAACAAAGAGCACAGCAACCACAGCCACAGCCACAGCAACAGTCATGTCAACCAGCCATTGTAAATAATGGGGTAGTTACTTCTAGCCAGATTCCAAGTCAGAGTGTACAGCAACCGATAACCTACTCTCAGCTTCAGCAACAGCAATTACTGTCAAGCAGTATTCCAACCCAGCAAAGTGTGCAGTCAGCTAGTAAGAATGCATTTCCAATGACGTCCTTGCCACAAGATTCACAATTTCAGCAACAGCTGGACCAGCAAGCTAGTCTCTTACAGAGGCAGCAACAACAGACACAGTTGCCACAATCCCCATTGCAGTTATTGCAACAAAGCCTGTCACAGAGGGCACCACAGCAACCGCAAGCAAGTCAACTGCCACAGCAAAATCTCTCGGAGCAACAACTGCAGTTACAGTTATTACAGAAATTTCAGCAGCAGCAACAGCAACTTGTACCCCCAGCGAGCCCACTTTTGCAGGCTCAGCTGCTACAGCAACAAAATGCTCACCAACAAAACCAGCAGCTACCACAGCTACCTTTTTCTCAGCATCAACCTCAACAGGTTAACAACAATGCATTCTCGACAGAGAAGCTTCTCAACAGCAACAGCTTCTCTTCTTCAGCTCTGATGCAACCACAACAGCTTCCCTTGAACCAACCCCAGAACACACAGAAACCACTTACAACTATCACAGCTCCTTCTACTCTTACAGAAGGAGATGCTCCATCATGCTTAACTTCACCGTCTACTAATAATTGCCAGATATCCTCACCAAATCTCCTGAAGAGAAATCAACAAGTACCAGCCACGTTAGGGTGCAGCCTGGTAGTTGAGCCTGCAAGCAATCTGATTCAGGAGCTTCAGAGCAAGTCTGACATCCAGATTAAACCTGAGTTTACTGCTGTAAAAGGACCTGACCAACAGAAGTATAAAGCGGCAATCCCTGATCAGCTGGATGCTTCCTCTTCTGGAACATCCTATTGCCTTGATCCTGTTAATATCCAGCAGAACTTCCAACTTCCCAACTTCTGCATGGATGGGGATGTCCAATCACACCCCAGGAACAGTCTACCATTTGCCTCTAATCTTGATGGACTAACGCCTGATACTTTACTCTCAAGAGATTATGACTCACAAAAAGACCTTCAAAACTTGCTCTCTAATTATGGTGGTGCTCCAAGGGATATTGAGACAGAGCTGTCAACTGCTGCCATCAGCTCACAGTCATTCGGGGTGCAAAACATACCTTTTAAGCCTGGTTGTTCAAGCGATCTTGCCATCAATGATGCTGGGGTTTTGAATAATGGTTTGTGGACAAACCAGACTCAACGTATGCGAACATATACTAAGGTCCAAAAGCGTGGCTCTGTAGGAAGATGTATTGATGTCACCCGTTACAAGGGTTACGATGAACTCCGACATGATTTGGCTCGTATGTTTGGAATTGAAGGTCAACTAGAAGATCCTCTAAGGACTGACTGGAAATTAGTATATGTCGATCATGAAAATGACATTCTTCTTGTTGGTGATGACCCATGGGAAGAGTTTGTGAGCTGTGTCCAGAGCATAAAGATATTGTCATCTGCTGAAGTGCAGCAAATGAGCTTGGATGGGGATTTAGTGTGCTGAAGTTTGCAGTTATCAAATGACATCTTAGAGATGCAAAATTGACGAACTGTTGACTGATCTGAAATTGCTTCAATGTCAAGCTTGCATCTGAAGCGCCTGTAATTATCAATGCCATGCTTGCAAATGCCGTATATGCTGAGGCAGGTACAGTTACTATTGGGAGCACTTTTTGTGCAAGCTACAAAGTCTACTACAACTCAGATCCATATCGGATACCCACCAAGCATGGAAAATGTTATGCGAAAGCAATTTTTTTCTTATACACCTAAACTGTTAGAATTTCATTAAGATTACTTCTATTAAATAGGTTTCTTGTTTATTCCTCAAAATGTTGTCATAAACGCAATTATATT 3713 0.4406 MKVPSNGYLPNSGEGERKAINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKEADLIPSYPNLPSKLICMLHNVALHADPETDEVYAQMTLQPVNKYDKEAILASDMGLKQSRQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDSTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKQQLLLGVRRANRQQPPLSSSVISSDSMHIGILAAAAHAAANSSPFTIFYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGISDLDPVRWKNSQWRNLQMLNDKIRSFPEFSVSFHTHYGSMSNNANVLDPLFLSSKVGWDESTAGDRPSRVSIWETEPVVTPFYICPPPFFRPKFPKQPGMPDDESDMDNTFKRAMPWLGDEFGMKDASSSIFPGLSLVQWMSMQQNNQFSAAQPGFFPSILSSNSLHGNLGTDDPSKLLSFQTPALSSPNLQFNKPSLQNHVNQLQQPPASWPQQPQLQSLMQTPINQLQQQRQPQQQQLTEPQNLPQQQQLQQHQPQLHQQRAQQPQPQPQQQSCQPAIVNNGVVTSSQIPSQSVQQPITYSQLQQQQLLSSSIPTQQSVQSASKNAFPMTSLPQDSQFQQQLDQQASLLQRQQQQTQLPQSPLQLLQQSLSQRAPQQPQASQLPQQNLSEQQLQLQLLQKFQQQQQQLVPPASPLLQAQLLQQQNAHQQNQQLPQLPFSQHQPQQVNNNAFSTEKLLNSNSFSSSALMQPQQLPLNQPQNTQKPLTTITAPSTLTEGDAPSCLTSPSTNNCQISSPNLLKRNQQVPATLGCSLVVEPASNLIQELQSKSDIQIKPEFTAVKGPDQQKYKAAIPDQLDASSSGTSYCLDPVNIQQNFQLPNFCMDGDVQSHPRNSLPFASNLDGLTPDTLLSRDYDSQKDLQNLLSNYGGAPRDIETELSTAAISSQSFGVQNIPFKPGCSSDLAINDAGVLNNGLWTNQTQRMRTYTKVQKRGSVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPLRTDWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSSAEVQQMSLDGDLVC 1119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00949 1119 FunFam Auxin response factor 1018 1112 - -
Bach5g00949 1119 Pfam AUX/IAA family 1020 1109 IPR033389 -
Bach5g00949 1119 MobiDBLite consensus disorder prediction 544 593 - -
Bach5g00949 1119 SUPERFAMILY DNA-binding pseudobarrel domain 116 255 IPR015300 -
Bach5g00949 1119 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 17 649 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bach5g00949 1119 Gene3D - 1018 1112 - -
Bach5g00949 1119 CDD B3_DNA 125 217 IPR003340 GO:0003677
Bach5g00949 1119 Gene3D - 289 398 - -
Bach5g00949 1119 Pfam Auxin response factor 252 334 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bach5g00949 1119 Gene3D - 123 227 IPR015300 -
Bach5g00949 1119 SMART B3_2 126 228 IPR003340 GO:0003677
Bach5g00949 1119 ProSiteProfiles PB1 domain profile. 1023 1116 IPR000270 GO:0005515
Bach5g00949 1119 Pfam B3 DNA binding domain 126 227 IPR003340 GO:0003677
Bach5g00949 1119 ProSiteProfiles B3 DNA-binding domain profile. 126 228 IPR003340 GO:0003677
Bach5g00949 1119 MobiDBLite consensus disorder prediction 633 664 - -
Bach5g00949 1119 FunFam Auxin response factor 289 348 - -
Bach5g00949 1119 FunFam Auxin response factor 124 228 - -
Bach5g00949 1119 SUPERFAMILY CAD & PB1 domains 1036 1101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00949 Bach-Chr5 6684940 6692961 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00949 1 527 B3 DNA Binding Superfamily AT1G19220 77.841 0.0 832
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Bach5g00949 AUX_IAA 4.1e-09 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00949 K14486 - gmx:100804628 888.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00949 5 6684940 6692961 Bach2g01413 2 23324063 23331153 BWGD
Bach5g00949 5 6684940 6692961 Bach5g00949 5 6684940 6692961 ECH