Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00906 ATGGGTGATGTGCCAACCCCCTTCACAATCTCACCTCCTCCACCTCCTCTATCTTCTTCGCCAAAATCCAAATTGCCCATCTTGTGTTATGGCCTAGCAGTGGTGGGGACCGCTGCTATAGTGTTAGTTATATACAACCTCATCATCGTCAAACGGTGTAGCAGGCGTCAAATACAGTCAGGGGCTTCTGGGTCAAATCGGATGGTGGTGGAGGCTGCAACAAGTAGGAGTTTTGAGAGCTCAAATAGGAACTTGCTTTCAAGCTTCAAGTACAAGAAAGAGCAACAACAGGGTGGGGATGTTGCTGCCGCGGATTATGAATGCCCAGTTTGTTTATCAGTTTTTGAAGAAGGGGAGCAAGTGACAAAACTGCCACGCTGCAACCACTCTTTCCATGCGCCTTGTATAGACATGTGGCTTTACTCTCACTTCGATTGCCCAATTTGTCGAACACCTGTTGGGCCTTTTGGTGGCCGCCGTTTTCTACCGGAGAGTCAGTCGCCGGCGGAGAATTCTCGTGAAGGGTTGCTAGAATCCAGCGGGGCCAATTGA 552 0.4964 MGDVPTPFTISPPPPPLSSSPKSKLPILCYGLAVVGTAAIVLVIYNLIIVKRCSRRQIQSGASGSNRMVVEAATSRSFESSNRNLLSSFKYKKEQQQGGDVAAADYECPVCLSVFEEGEQVTKLPRCNHSFHAPCIDMWLYSHFDCPICRTPVGPFGGRRFLPESQSPAENSREGLLESSGAN 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00906 183 MobiDBLite consensus disorder prediction 1 21 - -
Bach5g00906 183 MobiDBLite consensus disorder prediction 7 21 - -
Bach5g00906 183 SUPERFAMILY RING/U-box 107 156 - -
Bach5g00906 183 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 25 153 IPR044675 -
Bach5g00906 183 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 79 157 IPR013083 -
Bach5g00906 183 MobiDBLite consensus disorder prediction 165 183 - -
Bach5g00906 183 CDD RING-H2_EL5-like 107 150 - -
Bach5g00906 183 MobiDBLite consensus disorder prediction 163 183 - -
Bach5g00906 183 Pfam Ring finger domain 107 150 IPR001841 -
Bach5g00906 183 ProSiteProfiles Zinc finger RING-type profile. 108 150 IPR001841 -
Bach5g00906 183 SMART ring_2 108 149 IPR001841 -
Bach5g00906 183 FunFam RING-H2 finger protein ATL52 67 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00906 Bach-Chr5 6375105 6375656 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00906 32 153 C3H Transcription Factor Family AT5G17600 37.405 1.56e-21 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00906 - - aprc:113852327 211.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00906 5 6375105 6375656 Bach2g01464 2 23685794 23686360 BWGD
Bach5g00906 5 6375105 6375656 Bach5g00906 5 6375105 6375656 ECH