Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00901 GGAGAAAGAGTAGGAGGGAGCAAGGAGCAATTTTTGGAATTTAGAGTGAGAGAATAGAGCAGCAAGCTTTCAGTGAGTAGTGGGTTGGGGTTCCTAGAGAGGAGACATGCTTGAATTGAACCCAGCAGCTCTATTACTTGCTTCTTCATGCCATACCAGATCCCAAAGGAATTGATTGAAGGTTTCGAGAATTCAGGTTGCAGTATTTTACATTGAAGCGATCAAGATCTGAGTAATGTCTATGCGCAAGGTTAAATGAAGCCAACTTTCTTGTTGAAACATCCTGATATCGACTTCAATTGTCCTCAAGTTGATCAATCCATGGCTCGTGTTCCTTACCCTTTTGCTGATACTTTCTTTGGTGGTTCATTAGCTGCATATGGACCACAGGTTATTAATCAACCCCAAATGGTGCCCCAGATGTTGGGATTGTCATCCACAAGAGTTGCATTACCTCTTGATCTTGCAGAAGATGGACCCATTTATGTCAATGCGAAACAATATCATGGTATACTGAGAAGGCGACAATCACGGGCGAAGCTGGAGGCTCAAAACAAACTCATCAAAAACCGTAAGCCATATCTTCATGAGTCTCGCCACCTTCACGCTTTAAAGAGGGTTAGGGGATCTGGGGGACGCTTTCTCAGTACTAAACAGCTTCAACAGTCTAATCCTGAACTTGTCACCATTGCTTATTCTGGCTCAGACTGTGTCAACTTGTATCAAAAGAATGATGCATCAGAGGTGGAAAGTCATCCACCAAGACCCGGCAAAATTGCATCATCCACCACTACAACAACGTACTCTGATATGACAAGCTTGTCCACCAACACTGTCAATTTTAGGCAGCCAGAGCTCAAATTCTTGGGGAGCTCTTCAAACATTGTTGCAGCATCAGCATCACAGTGCAGTGGTGGTGGACTCACCTTCAATGGAACCCAGCAACGTGCTCCAGTAGTCCGGTGA 966 0.4451 MKPTFLLKHPDIDFNCPQVDQSMARVPYPFADTFFGGSLAAYGPQVINQPQMVPQMLGLSSTRVALPLDLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKLIKNRKPYLHESRHLHALKRVRGSGGRFLSTKQLQQSNPELVTIAYSGSDCVNLYQKNDASEVESHPPRPGKIASSTTTTTYSDMTSLSTNTVNFRQPELKFLGSSSNIVAASASQCSGGGLTFNGTQQRAPVVR 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00901 236 ProSiteProfiles NF-YA/HAP2 family profile. 72 132 IPR001289 GO:0003700|GO:0006355
Bach5g00901 236 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 75 129 IPR001289 GO:0003700|GO:0006355
Bach5g00901 236 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 12 181 IPR001289 GO:0003700|GO:0006355
Bach5g00901 236 ProSitePatterns NF-YA/HAP2 subunit signature. 77 97 IPR018362 GO:0003677|GO:0016602
Bach5g00901 236 MobiDBLite consensus disorder prediction 161 180 - -
Bach5g00901 236 Gene3D - 72 134 - -
Bach5g00901 236 PRINTS CCAAT-binding transcription factor subunit B signature 106 129 IPR001289 GO:0003700|GO:0006355
Bach5g00901 236 PRINTS CCAAT-binding transcription factor subunit B signature 75 97 IPR001289 GO:0003700|GO:0006355
Bach5g00901 236 SMART cbf3 71 132 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00901 Bach-Chr5 6346097 6349552 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00901 22 138 CCAAT-HAP2 Transcription Factor Family AT1G17590 63.866 7.27e-43 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Bach5g00901 CBFB_NFYA 2.2e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00901 K08064 - qsa:O6P43_002694 293.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00901 5 6346097 6349552 Bach5g00901 5 6346097 6349552 ECH