Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00888 ATGTTGCCTTCCACCTCGACAGCTCCCAGGTCGAAACTGTTGGTTCCTTGTCACGGTCATCCAAATTCACAGAACAGGGAGAAAGGGGAAGGGAATCTTCTTGGAGAAAGTTTTCGAGAGAAAGGGGCTTCGGACATGGAGAATCTTACGGGAGAGGTTCAAATGAGTAAGAAGGACGACGAGGTTGGACCCATGGTTGAGGAGGAAGAGGCCGAAGGAGAGGTGGGTTCGAGCTTGACCATGGAAAAGGTGGCTGCAGCTAAGAAATTGATTGAAAACCATTACAGGGCTCAGATGAAGCATATCAAGGATCGCAAAGAGAGGCGGTCAGTGCTAGAAAAGAAGTTAGCTTCTTCTCATGTACCAGAAGAGGAACAGCTCAATCTACTTAAAGATTTAGAGAGGAAGGAGACTGAGTATATGCGGCTAAAAAGACACAAAATTTGTGTTGATGATTTTGACCTTCTAACTATCATTGGGAGGGGAGCCTTTGGAGAGGTAAGACTGTGTAGGGAGAAGAAATCAGGTAATATTTTTGCCATGAAAAAGTTGAAGAAGTCTGAAATGCTCAGCAGGGGACAGGTTGAACATGTTAGAGCTGAAAGAAACTTGCTTGCAGAAGTCGCCAGTCACTGCATTGTGAAACTCTATTACTCTTTTCAGGATGCTGAATACTTATATCTTATAATGGAGTATTTACCTGGTGGTGATGTGATGACTTTGCTGATGAGGGAAGAAACTTTGACGGAAACTGTTGCTAGATTTTACATTGCTCAAAGCGTTTTAGCTATAGAGTCTATTCATAGACACAATTACATTCATAGAGATATAAAACCCGACAACCTTCTACTGGACAAAAATGGTCATATGAAGCTTTCTGATTTTGGTCTTTGCAAGCCACTTGATTGTTCAAATTTATCAACTATAAATGAAAATGAAGTCCTAGATGATGAAAATTTGAATGATACCATGGACATTGATGGCTCCTGCCCAAATAGCAGAAGTGGAAGGCGATGGAAAAGTCCCTTCGAACAACTTCAGCATTGGCAAATCAACAGAAGAAAGTTGGCATATTCCACAGTTGGAACTCCAGACTATATTGCTCCAGAAGTGTTGCTGAAAAAGGGATATGGTGTGGAGTGTGACTGGTGGTCTCTTGGTGCTATAATGTATGAGATGCTTATAGGTTACCCCCCATTTTACTCCGATGATCCAGTAACAACATGCAGAAAGATTGTGCATTGGAGAAATCACTTAAAATTTCCAGAGGAGGCAAGGTTGACACCTGAAGCAAAGGATCTGATATGTAGGTTGCTTTGTGATGTTGAACATAGGCTTGGTACAGGAGGGGCAGATGAAATTAAAGCTCATCCTTGGTTCAAAGATGTTGTATGGGAGAAAGTCTATGAAATGGAGGCGGCATTCAAACCGCAAGTCAATGATGAACTTGACACTCAAAATTTTATGAAATTTGATGAGGTTGAACAACCAAAAGCAACTAGAACTGGATCTGGACCTATCAGAAAGATGTTGTTGACTCCCCAAGATCTTAGTTTTGTTGGCTATACATATAGGAATTTTGATGCTGTCAAGGGGATGCTTCATTCTTTAGATGGAAGAGATGGTTCACCGGAGCGGTCATCCATCGACTCCACAAAGAGTGATTCTGCAATAAACTATTCAACCGGGTACTCATGGGACAGCCCGAAGGCATAG 1716 0.4202 MLPSTSTAPRSKLLVPCHGHPNSQNREKGEGNLLGESFREKGASDMENLTGEVQMSKKDDEVGPMVEEEEAEGEVGSSLTMEKVAAAKKLIENHYRAQMKHIKDRKERRSVLEKKLASSHVPEEEQLNLLKDLERKETEYMRLKRHKICVDDFDLLTIIGRGAFGEVRLCREKKSGNIFAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVMTLLMREETLTETVARFYIAQSVLAIESIHRHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSNLSTINENEVLDDENLNDTMDIDGSCPNSRSGRRWKSPFEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGVECDWWSLGAIMYEMLIGYPPFYSDDPVTTCRKIVHWRNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTGGADEIKAHPWFKDVVWEKVYEMEAAFKPQVNDELDTQNFMKFDEVEQPKATRTGSGPIRKMLLTPQDLSFVGYTYRNFDAVKGMLHSLDGRDGSPERSSIDSTKSDSAINYSTGYSWDSPKA 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00888 571 ProSitePatterns Protein kinases ATP-binding region signature. 159 182 IPR017441 GO:0005524
Bach5g00888 571 Gene3D Transferase(Phosphotransferase) domain 1 355 478 - -
Bach5g00888 571 MobiDBLite consensus disorder prediction 1 48 - -
Bach5g00888 571 MobiDBLite consensus disorder prediction 549 571 - -
Bach5g00888 571 MobiDBLite consensus disorder prediction 538 571 - -
Bach5g00888 571 PANTHER SERINE/THREONINE-PROTEIN KINASE 47 509 - -
Bach5g00888 571 Gene3D Transferase(Phosphotransferase) domain 1 237 304 - -
Bach5g00888 571 FunFam Non-specific serine/threonine protein kinase 114 236 - -
Bach5g00888 571 FunFam Non-specific serine/threonine protein kinase 237 304 - -
Bach5g00888 571 ProSiteProfiles Protein kinase domain profile. 153 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach5g00888 571 MobiDBLite consensus disorder prediction 32 48 - -
Bach5g00888 571 SUPERFAMILY Protein kinase-like (PK-like) 136 508 IPR011009 -
Bach5g00888 571 SMART serkin_6 153 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach5g00888 571 SMART pkinase_C_6 461 526 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bach5g00888 571 CDD STKc_NDR_like 151 525 - -
Bach5g00888 571 Pfam Protein kinase domain 155 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach5g00888 571 Pfam Protein kinase domain 351 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach5g00888 571 Gene3D Phosphorylase Kinase; domain 1 479 489 - -
Bach5g00888 571 ProSiteProfiles AGC-kinase C-terminal domain profile. 461 534 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bach5g00888 571 ProSitePatterns Serine/Threonine protein kinases active-site signature. 272 284 IPR008271 GO:0004672|GO:0006468
Bach5g00888 571 FunFam Non-specific serine/threonine protein kinase 359 478 - -
Bach5g00888 571 CDD MobB_NDR_LATS-like 87 148 - -
Bach5g00888 571 Gene3D Phosphorylase Kinase; domain 1 118 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00888 Bach-Chr5 6244944 6252058 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00888 52 561 AGC Kinase Gene Family AT2G19400 78.168 0.0 800
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Bach5g00888 Pkinase 9.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00888 K08790 - qsa:O6P43_022436 881.322