Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00879 ATGCTCAGAGACCTGCTTTCAGGTACAAGCAGAGAGAAAATGGCGATTGCTCACGGTGGCTGTGGTGATAGCGGTGGCGGTGGGTTTTGTTCGGTATTCTCGTCCACTCTCTTGACGGAACCCATTGATAAGGTGTTACTGAGTAAAGCTACGGAAGCACAGAATGTGAAAGTCATGGGGGAAGCAGTGACAGTCAAATCAGAGCAAGTAACCGTCTTTGATGATGAAGCTTGTGCTAATTCTTGCTCCTCCTTCGATGCTGAAGATGAGGACCACAACGACGTTTTCCGATCATCGTCTTCGTCCACGAAATTCAGTGAAGGTTCAGAAAGGAAAACCACCTCCGAAGTGAACGAAGAGAGGCCTTTTGAAGAGGTTCGGCTGGTTAATATCAAAGAAGAGGTAGATGACTGTGACAGAGATAGAGGTGAATCCGGTGATCGTTGTTATAACGTGGTTAGTGGGTTTTCTTCTACCTCGTCGATTGAGTTGCCGAAACCGATGGAGGGGTTGCACGAGTTGGGTCCACCACCGTTCCTGAAGAAGACATTTGAAATGGTTGAGGACCCGGAAACCGACTCGATTGTGTCCTGGAGCAAATCTCGTGATAGCTTCATCGTTTGGGATTATCACGAATTCTCCAGAATCCTTCTCCCTAAATACTTTAAGCACAGCAATTTCTCCAGTTTCATTCGCCAGCTCAACACTTATGGGTTTAGGAAGGTTGATTCGGATCGTTGGGAGTTTGCAAATGAGGGATTTCGTGGAGGGAAGAAGCATTTGCTGAAGAACATCAGGAGAAGAAGCAAGTATAACAAACAACAACAAGGAACATTCAATTTGACGAAGCCCGCCCTGGAAGCTGAATTTGAGAAACTGAAAAGGGACCAAAACATGATGAAAGTGGAAATTCTGAAGCTGAGGCAGCAACAAGAGAATTCACAGATTCACCTCACAAATGTGCACGACCGACTGCGGTGCGCTGAGATGAAGCAACATCAGATGCTATTTTTCCTGACCAGAATGGCTATAAATCCAAAGTCAATTCAACAGCTGATCCAGAAGATAAAGCGAAAAAGAGAGCTTGATGGGGTTGAGATAAGCAAGAGATGCAGATTACTGGGAACACAACCCCCTGCTACCCCCAGTGTTCATTGTAGAAAACAAGTTAATGAAGATTTGGCTTCATTGCAACCCGAGCTCAAGGGGATCTTTTCTGAAGATGTGAACACTACCATGGTGAATCCTCCATCCCCTCCTCCGCTGAAAGATGAATTATGCAGACCTGTTATACAAGGCTTGAGGGCCAATGCTTTCAGAGCAAGTGCACAAGATGTCTTTTCTGCCTATCATGTTGTGTCAGAAAAACTGATGAGGGAAAACTCCATCGTGGATGAAGGACTAGATGTGAATGACACAAATATCTATCTTGAATTGGAGGACTTGATCAGTAAACCATCGGATTGGGGGGGTTCCGCAATTGGGTTGGTGGGGCGAACTGGTTATATATGA 1512 0.455 MLRDLLSGTSREKMAIAHGGCGDSGGGGFCSVFSSTLLTEPIDKVLLSKATEAQNVKVMGEAVTVKSEQVTVFDDEACANSCSSFDAEDEDHNDVFRSSSSSTKFSEGSERKTTSEVNEERPFEEVRLVNIKEEVDDCDRDRGESGDRCYNVVSGFSSTSSIELPKPMEGLHELGPPPFLKKTFEMVEDPETDSIVSWSKSRDSFIVWDYHEFSRILLPKYFKHSNFSSFIRQLNTYGFRKVDSDRWEFANEGFRGGKKHLLKNIRRRSKYNKQQQGTFNLTKPALEAEFEKLKRDQNMMKVEILKLRQQQENSQIHLTNVHDRLRCAEMKQHQMLFFLTRMAINPKSIQQLIQKIKRKRELDGVEISKRCRLLGTQPPATPSVHCRKQVNEDLASLQPELKGIFSEDVNTTMVNPPSPPPLKDELCRPVIQGLRANAFRASAQDVFSAYHVVSEKLMRENSIVDEGLDVNDTNIYLELEDLISKPSDWGGSAIGLVGRTGYI 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00879 503 Gene3D - 172 269 IPR036388 -
Bach5g00879 503 PRINTS Heat shock factor (HSF) domain signature 217 229 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach5g00879 503 PRINTS Heat shock factor (HSF) domain signature 179 202 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach5g00879 503 PRINTS Heat shock factor (HSF) domain signature 230 242 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach5g00879 503 SUPERFAMILY "Winged helix" DNA-binding domain 175 268 IPR036390 -
Bach5g00879 503 ProSitePatterns HSF-type DNA-binding domain signature. 218 242 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach5g00879 503 Pfam HSF-type DNA-binding 179 268 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach5g00879 503 SMART hsfneu3 175 268 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach5g00879 503 MobiDBLite consensus disorder prediction 88 119 - -
Bach5g00879 503 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 165 372 IPR027725 -
Bach5g00879 503 FunFam Heat shock transcription factor 1 172 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00879 Bach-Chr5 6173808 6175773 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00879 165 503 HSF AT2G26150 40.058 1.89e-81 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Bach5g00879 HSF_DNA-bind 4.2e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00879 K09419 - qsa:O6P43_022426 504.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00879 5 6173808 6175773 Bach5g00879 5 6173808 6175773 ECH