Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00875 ATGGACGCTGTCTTCTCCCTCTCTGAAGCCGCCAGAAGGGATTTCCTGCGTTCTACACTGCAGTCTTATGGCGGCGCTTACATTTGTGTGTGGTCATATGATTCCCTCTCATCCAATCGTTTGTTGTTCTTGGATGGATTCTACAACGAAAGCAGCAACCAACCCAGCACTTCTTCGGTGATCAGTGTTGCCCAGAGTCTTTTTAACAAATATAGGGCATTGACATTTGATATCAATGACAATCGTGTTCCGGGGCTGGCTTTCAGGACCAATCGCAACTTAGAATTTCAACAAGGGGATCTTCTAAGACTTGCATGGACAGATATACAAAAGCAGTTCTATCAGGAAGCAAGGATTAAGACAGCTGTTTTCATGGGGAGCAACGGAGGAGAAATCGAACTTGGATTCTCAACTATGCCTCAAGATTACGTTCAAACAGCTCTGAGAATATTTCCGGCTGATGATTTATCTAGATCGCAACAAGTACAGCTTATAGATCAGAACCCACCATCATCATCATCATCTTCTTTGAGATCATTATCAAACAGCCCAGAATACTCATCCCTCCTACTCAATATTCCAAGCACAACCCACTTCCCTGAAACCCTTGGAGTGGTTCCCACAATGCAGCCAGCGCCAGTGTCTACTTCCACAGCTCATAGCCCTCACCAAGCAGCTATCCAAGCATTCGCTCAAGTCACTCAAATTCGATTCCCAACACCAGAGAGTGAAAGTGATGCAATAACGAGGGCAATACTTCAAGTTTTATCTTCTAATGCACCTTCTTCTTCTTCTACTTCTCATCACCAAACCCATCAAAATTTACCTCACGCTTCTGTGGTCCATCAACAGTCTAGTGCCTTCAAGAGGTATAGGCCAAATTCAGGCCCCAATTTCTCATCGCAAATGGCCTCCAATTTGCGCAGCCAAAGCATATTGAAGAGATCACTTGCATTCTTCGGAAACTTAAACATCAGGAGATTGAGAGAACGTAGTTTTCAGGCAACTCGTCCCGCTAGTACTCAGCTGCTTCATATGATATCAGAGCGAAGAAGACGTGAAAAAATCAATGAAAATTTTCGGGAACTTAGAGCACTACTTCCTCCAGGAACTAAGAAAGACAAAGCTTCAATACTTACAGCAGCGAAGGAGACATTGAGCTCTTTGATGGCTGAAATTGAGAAGCTTAGCGAGAGAAAAGTACAGTTGGGATCAGTTTTGCCAGGCAAAGAAGCTAGTTCCTCGGGAGAAAGACTAACTGTTCGAGTTTTGCATGTTCCAGAATCAAGCTCATCACAGGAGCGAATGATAGACTTGCAAGTGATTGTGAGAGGACAAAGCTCCCAAGCTGATATATTGATTCGCTTATTGGAATTCATAAGACAAGATCGGAACGTGAGCTTGGTTTCTATAGATGCTAACACCCATATGGCAGAAGGGACTGCTCTCAATCAAGTTCATTTAAGACTAAAGATTGAGGAAAGCGATTGGGACGAGGCTGCCTTCCAGGAAGCAGTGAGAAGAGTGGTTGCTGACGTGGCATAG 1545 0.4414 MDAVFSLSEAARRDFLRSTLQSYGGAYICVWSYDSLSSNRLLFLDGFYNESSNQPSTSSVISVAQSLFNKYRALTFDINDNRVPGLAFRTNRNLEFQQGDLLRLAWTDIQKQFYQEARIKTAVFMGSNGGEIELGFSTMPQDYVQTALRIFPADDLSRSQQVQLIDQNPPSSSSSSLRSLSNSPEYSSLLLNIPSTTHFPETLGVVPTMQPAPVSTSTAHSPHQAAIQAFAQVTQIRFPTPESESDAITRAILQVLSSNAPSSSSTSHHQTHQNLPHASVVHQQSSAFKRYRPNSGPNFSSQMASNLRSQSILKRSLAFFGNLNIRRLRERSFQATRPASTQLLHMISERRRREKINENFRELRALLPPGTKKDKASILTAAKETLSSLMAEIEKLSERKVQLGSVLPGKEASSSGERLTVRVLHVPESSSSQERMIDLQVIVRGQSSQADILIRLLEFIRQDRNVSLVSIDANTHMAEGTALNQVHLRLKIEESDWDEAAFQEAVRRVVADVA 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00875 514 MobiDBLite consensus disorder prediction 282 302 - -
Bach5g00875 514 Coils Coil 379 399 - -
Bach5g00875 514 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 340 389 IPR011598 GO:0046983
Bach5g00875 514 CDD bHLH_AtbHLH_like 345 397 IPR045239 -
Bach5g00875 514 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 340 404 IPR036638 GO:0046983
Bach5g00875 514 MobiDBLite consensus disorder prediction 161 180 - -
Bach5g00875 514 Pfam Helix-loop-helix DNA-binding domain 345 389 IPR011598 GO:0046983
Bach5g00875 514 SMART finulus 346 395 IPR011598 GO:0046983
Bach5g00875 514 Gene3D - 341 412 IPR036638 GO:0046983
Bach5g00875 514 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 107 512 IPR044658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00875 Bach-Chr5 6146524 6149682 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00875 1 514 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G56960 40.580 8.84e-95 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach5g00875 HLH 2.8e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00875 - - gmx:100807098 534.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00875 5 6146524 6149682 Bach2g01496 2 23920292 23923201 BWGD
Bach5g00875 5 6146524 6149682 Bach5g00875 5 6146524 6149682 ECH