Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00867 ATGGCTCCTAGAATCCTTTTATGTGGCGACGTTTTGGGCCGCCTCAACCAGCTCTTCAAGCGTGTCTCATCGGTCAACAAGTCGGCCGGCCCATTCGATGCGCTCTTTTGTGTGGGTCAATTCTTCCCGGACTCTCCAGACCAGCTTGATGAATTCATGGGCTATGTTGAAGGTAGAACGCAGATTCCTCTTCCAATTTACTTCATTGGCGACTATGGCGTTGGTGCCCCTAAAGTTTTGCTAGCTGCTTCTAAGGACCCGGTTAACAGTGGCTTCAAGATGGAGGGCTTGAAGGTTTGCGAGAATTTGTATTGGTTGAAAGGCAGTGGCAAATTCGTCCTCTTGGGGTTATCAGTTGCATATTTGTCTGGTAGGCAATCATCAGTTGTTCAACAGTTTGGAACTTACAGTCAGGATGATGTTGATGCTTTGCGAGCAATAGCTGATGAACCTGGAATAATCGATTTATTCTTGACTAATGAATGGCCAAGTGGGATCACAAATAGAGCAGCTAGTTCCGACATTCCTGCTGGGTTCTCGGATTCCATCGGCAGTGATTCTACCATATCAGAGTTAGTAGCGGAGATTAAACCTCGTTATCACATTGCAGGCAGTAAAGGTACCTACTATGCCCGTGAACCCTATTCTAATGTTGATGCTGTGCATGTGACCCGCTTCATAGGGCTGGCTTCTGTTGGAAATAGAGAGAAGCAGAAATTTATTCATGCAATTTCCCCCACTCCAGCATCCACTATGTCTTCAGTTGAGATTTCCATGAAAACCCTCAATACAACCTTATCGCCATACACAATGGTGGAGAAAATGACTTCTGCAAAAGATGCCACTAAGAGGTCTAGTGATAGTGTCTCTGATCCTCAGTATTGGAGATATGATGTTTCTCAAAAGCGACAGAAACAAGGAGCTGGAGATGGTGACAAACTGTGTTTTAAATTTTTATCTTCTGGCTCTTGTCCACGAGGAGACAAGTGCAATTTTCAACATGACATAGGTGCAATGGAACAGTATCAGAGAGGTGTTTGTTTTGATTTTTTGAACAAGGGGAAATGTGAAAGGGGCCCGGATTGCAAATTTAAGCATAGCTTGCAGGATGAAGGCAATAACGATACTCAAAGGAGGCCCAGATCTGAAAATAATAGCTCTAACAGCCGCAGATCAAAAGAGTGCTGGTTTTGCTTGTCAAGCCCCAATGTGGAGTCACATTTGGTCATCAGCATTGGAGAAAATTACTACTGTGCACTGGCCAAAGGCCCACTTGTCGAAGACCATGTGCTGTTAATGCCTGTTGAGCATATGCCCAGTACACTATCTCTGTTACCAGAATCTGAAGTTGAGTTCTGTAGATTTCAAAATAGTCTCAAGATGTACTGCAATAACCAAGGAAAAGAAGTCATATTTTTTGAGTGGGCTTCAAAACATAGTACTCATGCCAATGTTCAGGTTGTTCCTATCCCACCTTCCAAAACAATTATGGTTGAAAAGATATTCAATTTAGCTGCAGAAAAGTTGGGATTTAAATTTGTGGCAAAGAAATTTGATAGCAGTGCTGATGGAAGAAATTATTTGAAGACACAAATAGATAAAAATTCAAGTTTGTTCTATGCTGAACTCCCAGGAGGCATGGTACTTTTGCATATTGTTAATGAGAACGAGAGATTTCCAGCTCAATTTGGACGTGAGGTTGTGGCAGGGTTGCTGAATATAGCAGATAAGGCTGATTGGAGGAATTGTAAATATAGCAAGGAGGAAGAGACAAAGATGGTCGAAGATTTCAAGAGTCGATTTCAAAAATATGATCCAAACTGTTGACTGGTCAAACAAGGAATTCTCAATCTACAGCCATGCGATCATGATTATGGTGATTAGAGATGCATCTCTAAGTTATGAGTCCAGTTGCTTAAGATGATCCACGCAACTGAAAGGTTGCTTTTGTATTGCCAATTCCTATGGTGAACTTCGCTTTCCTGACATGGACTGGCTGTAGCTTCATTCTCTGTAAAGCTGGGTTGAGAATTGTGATGTAACAATTATCAGCTGCACATTATCTAGTCCCCTCAACCTTGCTGTATTTTTATATGTTTTAAAGGAAGAATGTTATGCTGTGGGTGATGACCATTATCTGCATTCATGCTAGGAAAAAAGCCAGATATCAACATGCTTTATGCTAGAAATTGAGAATGATGTTCGTAGACTGTTGGAACAAGCTGGGAAGCTAAGGGTGACAGAAACTATACGATTTAAGTAGCAACAGAGTGACTTACTTACTTTATTATGTAGGAGATTCAAATCTTACATATTTGCAGTTGCCTAGAGAATGTAATGTGAAGTAACGAAGATACATTTTTTTTTTTATTGTTTGGCTAAGACAAGTGTGTATTTGTCTTTTTTTGAAGTTTGTCTTGGTATTTTGTAGTCCG 2435 0.4107 MAPRILLCGDVLGRLNQLFKRVSSVNKSAGPFDALFCVGQFFPDSPDQLDEFMGYVEGRTQIPLPIYFIGDYGVGAPKVLLAASKDPVNSGFKMEGLKVCENLYWLKGSGKFVLLGLSVAYLSGRQSSVVQQFGTYSQDDVDALRAIADEPGIIDLFLTNEWPSGITNRAASSDIPAGFSDSIGSDSTISELVAEIKPRYHIAGSKGTYYAREPYSNVDAVHVTRFIGLASVGNREKQKFIHAISPTPASTMSSVEISMKTLNTTLSPYTMVEKMTSAKDATKRSSDSVSDPQYWRYDVSQKRQKQGAGDGDKLCFKFLSSGSCPRGDKCNFQHDIGAMEQYQRGVCFDFLNKGKCERGPDCKFKHSLQDEGNNDTQRRPRSENNSSNSRRSKECWFCLSSPNVESHLVISIGENYYCALAKGPLVEDHVLLMPVEHMPSTLSLLPESEVEFCRFQNSLKMYCNNQGKEVIFFEWASKHSTHANVQVVPIPPSKTIMVEKIFNLAAEKLGFKFVAKKFDSSADGRNYLKTQIDKNSSLFYAELPGGMVLLHIVNENERFPAQFGREVVAGLLNIADKADWRNCKYSKEEETKMVEDFKSRFQKYDPNC 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00867 608 PANTHER CWF19, CELL CYCLE CONTROL PROTEIN 4 607 IPR040194 -
Bach5g00867 608 ProSiteProfiles Zinc finger C3H1-type profile. 341 369 IPR000571 GO:0046872
Bach5g00867 608 MobiDBLite consensus disorder prediction 367 388 - -
Bach5g00867 608 Gene3D - 389 512 IPR036265 -
Bach5g00867 608 Pfam Protein similar to CwfJ C-terminus 1 383 502 IPR006768 -
Bach5g00867 608 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 313 335 IPR000571 GO:0046872
Bach5g00867 608 SUPERFAMILY CCCH zinc finger 313 338 IPR036855 GO:0046872
Bach5g00867 608 Pfam Protein similar to CwfJ C-terminus 2 527 605 IPR006767 -
Bach5g00867 608 CDD MPP_CWF19_N 6 232 - -
Bach5g00867 608 SUPERFAMILY HIT-like 393 466 IPR036265 -
Bach5g00867 608 SUPERFAMILY CCCH zinc finger 340 370 IPR036855 GO:0046872
Bach5g00867 608 Gene3D - 298 368 - -
Bach5g00867 608 MobiDBLite consensus disorder prediction 367 389 - -
Bach5g00867 608 ProSiteProfiles Zinc finger C3H1-type profile. 309 337 IPR000571 GO:0046872
Bach5g00867 608 SMART c3hfinal6 343 368 IPR000571 GO:0046872
Bach5g00867 608 SMART c3hfinal6 311 336 IPR000571 GO:0046872
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00867 313 371 C3H Transcription Factor Family AT1G68200 35.385 1.66e-06 48.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bach5g00867 CwfJ_C_1 5.5e-36 CL0265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00867 K24939 - gmx:100782106 983.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00867 5 6092886 6097638 Bach5g00867 5 6092886 6097638 ECH