Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00860 ATGGGTGGTCGACCTCCTTTCAAGCCGTTCACAGTCAGGTATTTCTCCCCCGCCTTCATCCTCATCACTATCATTCTCCTTGGCCTGTGGGTTCATGCAGAGCCTGATGATTCCAGAGAAATCCCTCCTCCTCCTTCAACTCTGGATGCTAAAAATGTTGATGAAGTTGATAGTATTGCGAATGGTGCCTCTCCACCTCCCTCAGTACTTGCTCCGCCACCTAATCAGAGACATAAAGTTCATTTCTTTAATCCAAGCGTAGTCGTTGTAGTAGGCGTAATGACTAGCATGTTATCTCTTACCTTTCTCCTACTTCTCTATGCCAAACACTGTAAGCGTGGGAATGTTGCTGCTCTCCCCGGGTTTAGGAGAAACCAAAATTCAAGAGGGCCACCAGCTTCTGCCGCAAGGAAGAACTCAGGGATTGACCGTGTTGTGATTGAGTCCTTGCCCGTTTTCAGATTCGGATCGCTGAGTGGGGAAAAGGATGGCCTTGAATGTGCTGTTTGCCTCACAACTTTTGAATCCATGAACGTTCTCAGATTGCTTCCCAAATGTAAACATGCCTTCCACGTTGAATGTGTAGATACATGGCTGGATGCACATTCCACTTGCCCGCTTTGTCGCTGCCGGGTCGACCCGGAAGACATTCTCCTCGTGGAAGCTGACAATATTTTGCGCAATAGTCAACCAATTCCTGCTGTTCAAGAAGATCAAGACCCGGAATACACTGACATTGAGATCGGAACAAACGGGTTGGAGCCAGAGTCAAACCAGGGTCTTCGCCGAGTCTCGGGGAGACACTCATCAGCTTGTGAAAGAGGGTTGTTGCAGCTTATTATGGTGAGAGCAGTTGGGAAGGAGTCGGGACGGGAAGCAGTTCAACATGAAGCGACGTCGTATAGACGATCTCTGGACAGTGCGGGTGCGCCAACTGGTATGAGAAGAAACAGCGAACCCGTGGAGGTTCGTTGCTTAGAGCGTCCCAGAAGAGACGGGCTGTTGTTGAGCCAGGATAAGACAAGAAGCTTGGATCGTAGGTTGGAGCACCGGATCATTGTCTCCCCCTCCCCAACATCCAGTGGGTTCCACCATCGATGGAGCGACGTACAGGCGTCAGATCTGCTTTATCTAACATCGGAGAACATCATCAGCGATGGCCGTAGAATAGTGTCGTTCTCATCCGCATCAGCGGGATCTAGGCGGTCACTATGGCGGCTGCGGCAGCGGCAGCAGAACATGCAGCTGCCGTTGCACTGGAACACGCCGCAAGAAGGTAGACAGGGGGAGGAGGACGAGCTGAACAACAGTAACATGAACAGTACAGATGGCAGGGGTGTAATAAATTCAAGAAGCTTGTCGGAAATCACGGGACTGAACAGGTATTCGAATAAGAACAGGGAGCAAGGTCAGGACGAGCATAATGAAGAACGAGAGCGACGGGCTGGGGTTGTATCCAGATGTTCTGACAAACTTACTGTTCCTGCAGCTGCCATTGTTGTAGCTTATCCTACCCTACCCTAG 1524 0.5046 MGGRPPFKPFTVRYFSPAFILITIILLGLWVHAEPDDSREIPPPPSTLDAKNVDEVDSIANGASPPPSVLAPPPNQRHKVHFFNPSVVVVVGVMTSMLSLTFLLLLYAKHCKRGNVAALPGFRRNQNSRGPPASAARKNSGIDRVVIESLPVFRFGSLSGEKDGLECAVCLTTFESMNVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRCRVDPEDILLVEADNILRNSQPIPAVQEDQDPEYTDIEIGTNGLEPESNQGLRRVSGRHSSACERGLLQLIMVRAVGKESGREAVQHEATSYRRSLDSAGAPTGMRRNSEPVEVRCLERPRRDGLLLSQDKTRSLDRRLEHRIIVSPSPTSSGFHHRWSDVQASDLLYLTSENIISDGRRIVSFSSASAGSRRSLWRLRQRQQNMQLPLHWNTPQEGRQGEEDELNNSNMNSTDGRGVINSRSLSEITGLNRYSNKNREQGQDEHNEERERRAGVVSRCSDKLTVPAAAIVVAYPTLP 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00860 507 MobiDBLite consensus disorder prediction 433 465 - -
Bach5g00860 507 MobiDBLite consensus disorder prediction 466 484 - -
Bach5g00860 507 SUPERFAMILY RING/U-box 144 214 - -
Bach5g00860 507 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 142 216 IPR013083 -
Bach5g00860 507 ProSiteProfiles Zinc finger RING-type profile. 167 209 IPR001841 -
Bach5g00860 507 MobiDBLite consensus disorder prediction 415 484 - -
Bach5g00860 507 MobiDBLite consensus disorder prediction 299 320 - -
Bach5g00860 507 Pfam Ring finger domain 166 209 IPR001841 -
Bach5g00860 507 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 73 482 - -
Bach5g00860 507 FunFam RING-H2 finger protein ATL43 142 216 - -
Bach5g00860 507 SMART ring_2 167 208 IPR001841 -
Bach5g00860 507 CDD RING-H2_EL5-like 166 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00860 Bach-Chr5 6019190 6020811 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00860 85 487 C3H Transcription Factor Family AT5G05810 43.720 3.09e-72 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00860 K19041 - qsa:O6P43_022402 407.527