Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00838 TCGCACGTGATAAATAAGTCAACAGATCTCCTCCCCCTCCCCTTCTCACCCACCATTATATAAACCCCCAGCCTCGGAGAATAGATAGCCCTTCACTTGAAGAAAGCATCATATTCCCTCTCTCTCTATCTCTTTCTCTCACTGAGCGTTAATTTGTCTCCTGAAAGACAACCATGGAAGACATTGGTAAGGAGTATGAGCATTACTGGGAGACCAACATGTTCCTCCAAACCGAAGAGCTTGACAGTTGGGGATTGGAAGAGGCTTTCTCCGGCGGCTACTACGATTCGAGCTCGCCGGATGGGGCAGCGACATCGGCGGCATCTAAGAACATTGTCTCCGAGAGGAATAGGAGGAAGAAGCTCAACGAGAGCCTCTTTGCACTCAGAGCCGTGGTCCCCAACATTAGCAAGATGGATAAGGCTTCTATAATAAAAGATGCAATTGAATATATCCAACAGTTGCACGAGCAAGAGAAGAACATTCAAGCTGAGATAATGGAACTTGAATCTCATGGGAAGAATCAATGCTATGAATACGAGCAGGATCAGCTGGAGCTCCCTGTGTTGCTCAGATCTAAGAAGAAGAAAACTGAACAGCAGCTTTATCATTCTGTCTACTCAAGAAACTCCCCTATTGAAGTCCTTGAGCTCAGGGTTACTTACATGGGAGAGAAAACGGTTGTCGTGAGCTTGACATGCAGTAAAAGGACAGATACCATGGTTAAGTTGTGCGAAGTGTTCGAATCTTTGAAGCTAAAGATCATTACAGCCAACATAACTACTTTCTCTGGCAGGCTTTTGAAGACAGTCTTCATTGAGGCAGACGAAGAGGAGAAAGATCTTTTGCAGATAAAAATCCAAACAGCAATTGCAACTCTTAATGATCCTCAAAGCCCTATGAGCATCTGA 911 0.4479 MEDIGKEYEHYWETNMFLQTEELDSWGLEEAFSGGYYDSSSPDGAATSAASKNIVSERNRRKKLNESLFALRAVVPNISKMDKASIIKDAIEYIQQLHEQEKNIQAEIMELESHGKNQCYEYEQDQLELPVLLRSKKKKTEQQLYHSVYSRNSPIEVLELRVTYMGEKTVVVSLTCSKRTDTMVKLCEVFESLKLKIITANITTFSGRLLKTVFIEADEEEKDLLQIKIQTAIATLNDPQSPMSI 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00838 245 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 50 113 IPR036638 GO:0046983
Bach5g00838 245 Gene3D - 45 114 IPR036638 GO:0046983
Bach5g00838 245 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 48 97 IPR011598 GO:0046983
Bach5g00838 245 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 46 230 - -
Bach5g00838 245 Coils Coil 87 114 - -
Bach5g00838 245 FunFam Basic helix-loop-helix (BHLH) DNA-binding superfamily protein 45 114 - -
Bach5g00838 245 SMART finulus 54 103 IPR011598 GO:0046983
Bach5g00838 245 Pfam Helix-loop-helix DNA-binding domain 55 98 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00838 Bach-Chr5 5792413 5797923 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00838 1 216 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 63.927 2.75e-85 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach5g00838 HLH 7.7e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00838 - - gmx:100817978 384.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00838 5 5792413 5797923 Bach2g01537 2 24275215 24279296 BWGD
Bach5g00838 5 5792413 5797923 Bach5g00838 5 5792413 5797923 ECH