Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00834 ATGCGGGATAGTGACAAGAAGTTGAATCACAGAGTATCTAGAAAAGTCGGTCATTTAGAAGCACAAACTGAGTCAAAACTACGCTTGTCATTGAAATTAAAAAAAAAAAGTACAAAATCCCAAGAGAAGAAGCAGAAACTGAAATCAAAATCTTCTAAACACAGAATTGGTGCAAGCTTGTCAAGGGGGACCACTACTGACTCTTCCAGTAAGGGGCTGAGCAAGGATTCTCCAAATAAGAAAATTATTATTAGACAAAATCTGCATAAATCAACTGATGGAAAATTGTCACAGAAGCTGTCTTCATCAAAGTTACAAGGTGAAAAATTTTCTTTTAGTACTGAGAATGAGGTAAAAGATGATGATGGGGAGGTTAAAATTCAAAAAGAAAAGAAGAAAAGGAGAAAGAAAAAAAGCCAAAGGGATAACACAGAGCTTGATGAAACTTTACGCCTGCAGAGGAGAACGAGGTACCTGTTAATTAAAATGAAACTGGAGCAGAACCTTATTGATGCTTACTCAGGGGAAGGTTGGAAAGGTCAGAGTCGAGAAAAGATTAGGCCAGAAAAGGAACTACAGAGAGCACAGAAGCAGATTTTAAACTGTAAACTTAGTATTCGTGATGCCATTCGCCAGTTGGATTCTCTTAGTTCTGTAGGTAGCATTGAAGATTCTGTCATTGCCCCAGATGGGTCTGTTTACCATGAACATATATTCTGTGCAAAGTGCAAGTTGCGTGAAGCTTTCCCAGATAATGATATCATACTCTGTGATGGCACATGCAACCGTGCTTTTCACCAAAAATGCCTTGATCCTCCTATGGACACCAAAAATATTCCTCCTGAAGATGAGGGATGGTTTTGCAAGTTTTGTGAATGTAAGATGAACATACTGGAGGTAGTGAATGCACATCTTGGGACTCACTTCTCAATGAACATTAACTGGCAGGATGTATTTAAGGAAGAAGCTGCTTTCCCTGCTGGTGATGCTGCATTACTAAATCCAGAAGAAGAATGGCCATCAGATGACTCAGAAGATGATGATTATAATCCAGAGAAGAGAGACGACAACAATAGCACCAGCACAGAAGATACTGATGATGCTGCGTCTGATGATTTAAGCAATTCTCCTTGTTCGTGGTTTTTAGAGGGTGAACATTCTGCAGGAAAGGAAGGCACTGGCCATGAATCTGTCAATAGCTGCATAGATTCTGATGAATCTGGTGAAATAGCATTTGGCCGTAGGCAACGTAAAGCAGTTGACTACAAGAAACTTTATGATGAAATGTTTGGGAAGGATGCTCCAGCTTGCGAACAAGTTAGTGAAGATGAGGACTGGGGTCCTGGCAGAAGAAGGCGTAGAGAAAAGGAATCTGATGCTGTTAATACTCTTATGACTCTACATGAGAGTGAGAATAAACATCCCAATACTGAAAGTGAAGATATGATAAGGAAAGTTCCTTCAGACATGCAAATTAAAAGGGCCTGTTTCAGGATTCCACACTATGCAATTAAGAAACTTCGAGAAGCTTTTGCTGAGAATGAACTTCCTTCAAGATCTGTAAAGGAGGGTCTTTCAAAAGAGTTGGGACTTGATCCTGAGAAGGTTAGCAAATGGTTCAAAAATGCACGTTACTTAGCACTTAAAACCAGAAAGCATGCAGAAGGAGCAGAACAACTTCAAAGTTTCATGTCGGGAAACTCAAAGGACTCTAGATTACATAATCCGGAGAATGCCGAGATTTTGACCTCAAACGAGGCCTCAAAAACAACTCTGACTGGTTCCCCAAAGAATGTTAAAGATGTCTCCCATGGAAAGCAAATCAAGCCATCTGGGCCTCCTTTGACGAAAAGGAAACCAAAAAAATCTCCACATCAGTCAACAGAAAATGGCAACCAGGACTTAATGGAGCTCAGTGATGACGTAAGCTTGAAGAAACTCTTGAAAGCAAGAAAGAGGAAGGTGAATTTTATGTTTGAAGGAGACTCTCAGACGGCAGAGATGGAATTTCAAAGACTTAGCAAAGTGAAGATTAAATTAGATAGCGTGAAGCAAAAATTAATTGAAATTCAAAATAGAGGAAAGGGTTCAGATGAGCCCCATTTGAAAGAACCAACAATAATTTATGTACCAGTAGCAGAACTAAGGGAAAAAGCCTGA 2160 0.3972 MRDSDKKLNHRVSRKVGHLEAQTESKLRLSLKLKKKSTKSQEKKQKLKSKSSKHRIGASLSRGTTTDSSSKGLSKDSPNKKIIIRQNLHKSTDGKLSQKLSSSKLQGEKFSFSTENEVKDDDGEVKIQKEKKKRRKKKSQRDNTELDETLRLQRRTRYLLIKMKLEQNLIDAYSGEGWKGQSREKIRPEKELQRAQKQILNCKLSIRDAIRQLDSLSSVGSIEDSVIAPDGSVYHEHIFCAKCKLREAFPDNDIILCDGTCNRAFHQKCLDPPMDTKNIPPEDEGWFCKFCECKMNILEVVNAHLGTHFSMNINWQDVFKEEAAFPAGDAALLNPEEEWPSDDSEDDDYNPEKRDDNNSTSTEDTDDAASDDLSNSPCSWFLEGEHSAGKEGTGHESVNSCIDSDESGEIAFGRRQRKAVDYKKLYDEMFGKDAPACEQVSEDEDWGPGRRRRREKESDAVNTLMTLHESENKHPNTESEDMIRKVPSDMQIKRACFRIPHYAIKKLREAFAENELPSRSVKEGLSKELGLDPEKVSKWFKNARYLALKTRKHAEGAEQLQSFMSGNSKDSRLHNPENAEILTSNEASKTTLTGSPKNVKDVSHGKQIKPSGPPLTKRKPKKSPHQSTENGNQDLMELSDDVSLKKLLKARKRKVNFMFEGDSQTAEMEFQRLSKVKIKLDSVKQKLIEIQNRGKGSDEPHLKEPTIIYVPVAELREKA 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00834 719 Gene3D - 495 563 - -
Bach5g00834 719 MobiDBLite consensus disorder prediction 336 350 - -
Bach5g00834 719 MobiDBLite consensus disorder prediction 556 637 - -
Bach5g00834 719 Coils Coil 673 693 - -
Bach5g00834 719 ProSitePatterns Zinc finger PHD-type signature. 240 291 IPR019786 -
Bach5g00834 719 MobiDBLite consensus disorder prediction 89 112 - -
Bach5g00834 719 MobiDBLite consensus disorder prediction 436 462 - -
Bach5g00834 719 Coils Coil 127 149 - -
Bach5g00834 719 MobiDBLite consensus disorder prediction 56 81 - -
Bach5g00834 719 SUPERFAMILY FYVE/PHD zinc finger 231 297 IPR011011 -
Bach5g00834 719 Coils Coil 192 212 - -
Bach5g00834 719 CDD PHD_PRHA_like 239 291 IPR045876 -
Bach5g00834 719 MobiDBLite consensus disorder prediction 1 146 - -
Bach5g00834 719 MobiDBLite consensus disorder prediction 560 600 - -
Bach5g00834 719 FunFam pathogenesis-related homeodomain protein 492 556 - -
Bach5g00834 719 MobiDBLite consensus disorder prediction 32 55 - -
Bach5g00834 719 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 231 288 IPR013083 -
Bach5g00834 719 FunFam pathogenesis-related homeodomain protein-like 231 291 - -
Bach5g00834 719 MobiDBLite consensus disorder prediction 436 484 - -
Bach5g00834 719 SUPERFAMILY Homeodomain-like 493 555 IPR009057 -
Bach5g00834 719 SMART HOX_1 492 554 IPR001356 GO:0003677
Bach5g00834 719 MobiDBLite consensus disorder prediction 334 403 - -
Bach5g00834 719 MobiDBLite consensus disorder prediction 113 129 - -
Bach5g00834 719 MobiDBLite consensus disorder prediction 1 31 - -
Bach5g00834 719 ProSiteProfiles 'Homeobox' domain profile. 490 550 IPR001356 GO:0003677
Bach5g00834 719 SMART PHD_3 239 292 IPR001965 -
Bach5g00834 719 Pfam Homeodomain 501 545 IPR001356 GO:0003677
Bach5g00834 719 CDD homeodomain 498 553 IPR001356 GO:0003677
Bach5g00834 719 PANTHER POLYCOMB-LIKE TRANSCRIPTION FACTOR 36 718 - -
Bach5g00834 719 Pfam PHD-finger 239 294 IPR019787 -
Bach5g00834 719 ProSiteProfiles Zinc finger PHD-type profile. 237 294 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00834 Bach-Chr5 5760890 5765604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00834 140 552 Homeobox Transcription Factor Family AT4G29940 57.412 2.35e-157 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-PHD Bach5g00834 Homeodomain 4.6e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00834 - - gmx:100787118 850.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00834 5 5760890 5765604 Bach2g01542 2 24317218 24321397 BWGD
Bach5g00834 5 5760890 5765604 Bach5g00834 5 5760890 5765604 ECH