Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00800 ATGGACTCTTGTTCTTCTCCTTCTCCTTCCCCACACTCCAACTCCCAAAACCAAAACTGGCTCACTTTCTCTCTTTCCCCTCACTCCTCCCACTCTCCGCTCTCCCTTTTCAACTCCTTCTCCTCTCCTTCGCCTGCACCTCCTCCCACTCTGACAGGCAGCAACATCGATGCGTCGGCGGAGGCAGCGGATGCTTCCGTTGGAGGTGCAACCAACCTGTCCATTTTCACAGCTGGCCCCAAGTTTGAGGACTTCCTCGCCGGCTCCTCCACCGTCACAGCCACAAGTACTGCACCGCCACCACTTCCGCACTTCTCCACCGACAACGAGATATACGATTCTGAGCTCAAGACAATAGCTGCCAGCTTCCTTCGCGGCTTCACTGCAACCGAACAAGCCGAGTCCCAGAAACAACAGCCTCCAGCTCCACCCGAGCCTTCCCCCAAGAAATCAGTCGACACCTTCGGCCAACGCACCTCCATCTACCGTGGCGTCACACGGCATAGATGGACGGGGAGATATGAAGCTCATCTATGGGATAACAGCTGTAGAAGGGAGGGGCAAAGTAGGAAAGGAAGACAAGGTGGCTACGATAAGGAAGAGAAAGCAGCCAGAGCTTATGATCTCGCTGCTCTCAAGTACTGGGGTCCGACCACCACCACCAACTTTCCTATTTCGAACTACGAGAAGGAGCTGGGAGGGATGAAGAACATGACGAGGCAGGAATTTGTTGCTTCTCTTCGAAGGAAGAGTAGTGGTTTCTCTAGAGGTGCCTCTATATACAGAGGAGTAACGAGGCACCACCAGCATGGTCGCTGGCAGGCAAGGATTGGCAGAGTTGCTGGGAACAAAGACCTCTACCTTGGCACTTTTAGCACCCAAGAAGAAGCTGCAGAGGCTTATGACATTGCAGCCATCAAATTTAGAGGGCTAAATGCGGTAACCAACTTCGATATGAGCCGCTATGACGTGAAGAGCATTGCAAACAGTAACCTTCCCATTGGGGGGTTATCAAGCAAAACCAAGAATTCTACTGATTCTCTATCAGAGAGCAAAACCCATGAGGGAAGCCGATCTGATGACAAAGACTTGTCCTCAGCTTCCTCGTCAGTACCCTTTGCATCACATTCACAGCCATCAAGTTCAACTTTTAGCTTTGCCATTCCCATCAAGCAAGACCCTTCAGATTATTGGTCCATTCTTGGTTACCAAAACCCTTCCCTCAATGGTGCCAAGAGCTCTTTCCAGTCTTCCACTAATGGCTCTGCATTGCAAAGCTCTAATACCACACCCTTCAGCATGGACTTCTCTGCTGCTGCTTCAAATAGTACTTCTGGCAGTGAAAGCAACAATGTTAATAACGCTTTTTTCGATGGGGGTATGTTAATGCAGCAGCAAAACGCAGGTGGTGCAGCTTCAACTTCAATCCCATTTGCCACACCCATTACCCTAAATAGCAACTTTAGTTACGAGAGCTCTTTTAGTTATGGAAACTGGGTTGGACCTACCCTGCACACATTCCAAACCCATGCAAAACCCAGTCTCTTTCAGACACCAATCTTTGGTATAGAATAA 1575 0.4984 MDSCSSPSPSPHSNSQNQNWLTFSLSPHSSHSPLSLFNSFSSPSPAPPPTLTGSNIDASAEAADASVGGATNLSIFTAGPKFEDFLAGSSTVTATSTAPPPLPHFSTDNEIYDSELKTIAASFLRGFTATEQAESQKQQPPAPPEPSPKKSVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGGYDKEEKAARAYDLAALKYWGPTTTTNFPISNYEKELGGMKNMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSIANSNLPIGGLSSKTKNSTDSLSESKTHEGSRSDDKDLSSASSSVPFASHSQPSSSTFSFAIPIKQDPSDYWSILGYQNPSLNGAKSSFQSSTNGSALQSSNTTPFSMDFSAAASNSTSGSESNNVNNAFFDGGMLMQQQNAGGAASTSIPFATPITLNSNFSYESSFSYGNWVGPTLHTFQTHAKPSLFQTPIFGIE 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00800 524 CDD AP2 160 226 IPR001471 GO:0003700|GO:0006355
Bach5g00800 524 MobiDBLite consensus disorder prediction 363 382 - -
Bach5g00800 524 FunFam AP2-like ethylene-responsive transcription factor 259 320 - -
Bach5g00800 524 SUPERFAMILY DNA-binding domain 160 226 IPR016177 GO:0003677
Bach5g00800 524 ProSiteProfiles AP2/ERF domain profile. 260 318 IPR001471 GO:0003700|GO:0006355
Bach5g00800 524 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 85 413 - -
Bach5g00800 524 MobiDBLite consensus disorder prediction 333 382 - -
Bach5g00800 524 MobiDBLite consensus disorder prediction 1 41 - -
Bach5g00800 524 Gene3D AP2/ERF domain 161 226 IPR036955 GO:0003700|GO:0006355
Bach5g00800 524 Gene3D AP2/ERF domain 260 320 IPR036955 GO:0003700|GO:0006355
Bach5g00800 524 SMART rav1_2 161 230 IPR001471 GO:0003700|GO:0006355
Bach5g00800 524 SMART rav1_2 260 324 IPR001471 GO:0003700|GO:0006355
Bach5g00800 524 PRINTS Ethylene responsive element binding protein signature 162 173 IPR001471 GO:0003700|GO:0006355
Bach5g00800 524 PRINTS Ethylene responsive element binding protein signature 300 320 IPR001471 GO:0003700|GO:0006355
Bach5g00800 524 MobiDBLite consensus disorder prediction 347 362 - -
Bach5g00800 524 FunFam AP2-like ethylene-responsive transcription factor ANT 160 226 - -
Bach5g00800 524 SUPERFAMILY DNA-binding domain 259 320 IPR016177 GO:0003677
Bach5g00800 524 MobiDBLite consensus disorder prediction 130 158 - -
Bach5g00800 524 Pfam AP2 domain 260 310 IPR001471 GO:0003700|GO:0006355
Bach5g00800 524 Pfam AP2 domain 161 216 IPR001471 GO:0003700|GO:0006355
Bach5g00800 524 MobiDBLite consensus disorder prediction 1 57 - -
Bach5g00800 524 CDD AP2 259 320 IPR001471 GO:0003700|GO:0006355
Bach5g00800 524 ProSiteProfiles AP2/ERF domain profile. 161 224 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00800 Bach-Chr5 5475699 5478589 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00800 92 524 AP2-EREBP Transcription Factor Family AT5G57390 57.111 1.56e-148 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Bach5g00800 AP2 1e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00800 K09285 - gmx:100797828 622.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00800 5 5475699 5478589 Bach5g00800 5 5475699 5478589 ECH