Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bach5g00785 | ATGAATTTCCACCCTAACACCTCTCTTCATCTAAGTCTCCCTGAGGAAAATCCACTCAACTTAGATCTTCTCCTTGAGCCATCTTCTTCTTCTTCATCTTCACCCACTGGGTCTTCCATTGAGCCTCGGGTTTTCTCATGCAACTATTGCCAGAGGAAGTTTTACAGCTCGCAGGCACTGGGAGGGCACCAAAATGCTCACAAGCTGGAGAGAACACTGGCAAAGAAGAGCAGAGAGCTCAGTTCTGCTGTGCAAAATGGTTATGGAGGATCAGAGCAGCGTTCATACCATGCTGGGCGTGTTGGATTGGACAACCAAGGACAAGGTAGTGGGAGAGTTGTTGCTGGTGGAGTAAGCTATGAAAGGAGAGAAATTGGGTATGGTTCTAAACAAGGAGGGGTGGGATCTTGGTCCAGGGTTTATGGGTCTGAAAATGTTCAGGAGGATATGAGCCAACTTGACTTGTCATTAAGGCTTTGA | 480 | 0.4729 | MNFHPNTSLHLSLPEENPLNLDLLLEPSSSSSSSPTGSSIEPRVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSRELSSAVQNGYGGSEQRSYHAGRVGLDNQGQGSGRVVAGGVSYERREIGYGSKQGGVGSWSRVYGSENVQEDMSQLDLSLRL | 159 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bach5g00785 | 159 | Gene3D | Classic Zinc Finger | 28 | 97 | - | - | |
Bach5g00785 | 159 | PANTHER | C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN | 20 | 86 | IPR044246 | GO:0009788 | |
Bach5g00785 | 159 | FunFam | Zinc finger protein 2 | 24 | 89 | - | - | |
Bach5g00785 | 159 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 47 | 67 | IPR013087 | - | |
Bach5g00785 | 159 | Coils | Coil | 66 | 86 | - | - | |
Bach5g00785 | 159 | SUPERFAMILY | beta-beta-alpha zinc fingers | 42 | 72 | IPR036236 | - | |
Bach5g00785 | 159 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 45 | 72 | IPR013087 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bach5g00785 | Bach-Chr5 | 5371898 | 5372377 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bach5g00785 | 1 | 159 | C2H2 Transcription Factor Family | AT5G57520 | 48.214 | 1.36e-31 | 109 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Bach5g00785 | None | None | None |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bach5g00785 | - | - | vra:106768043 | 153.68 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Bach5g00785 | 5 | 5371898 | 5372377 | Bach5g00785 | 5 | 5371898 | 5372377 | ECH |