Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00785 ATGAATTTCCACCCTAACACCTCTCTTCATCTAAGTCTCCCTGAGGAAAATCCACTCAACTTAGATCTTCTCCTTGAGCCATCTTCTTCTTCTTCATCTTCACCCACTGGGTCTTCCATTGAGCCTCGGGTTTTCTCATGCAACTATTGCCAGAGGAAGTTTTACAGCTCGCAGGCACTGGGAGGGCACCAAAATGCTCACAAGCTGGAGAGAACACTGGCAAAGAAGAGCAGAGAGCTCAGTTCTGCTGTGCAAAATGGTTATGGAGGATCAGAGCAGCGTTCATACCATGCTGGGCGTGTTGGATTGGACAACCAAGGACAAGGTAGTGGGAGAGTTGTTGCTGGTGGAGTAAGCTATGAAAGGAGAGAAATTGGGTATGGTTCTAAACAAGGAGGGGTGGGATCTTGGTCCAGGGTTTATGGGTCTGAAAATGTTCAGGAGGATATGAGCCAACTTGACTTGTCATTAAGGCTTTGA 480 0.4729 MNFHPNTSLHLSLPEENPLNLDLLLEPSSSSSSSPTGSSIEPRVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSRELSSAVQNGYGGSEQRSYHAGRVGLDNQGQGSGRVVAGGVSYERREIGYGSKQGGVGSWSRVYGSENVQEDMSQLDLSLRL 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00785 159 Gene3D Classic Zinc Finger 28 97 - -
Bach5g00785 159 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 20 86 IPR044246 GO:0009788
Bach5g00785 159 FunFam Zinc finger protein 2 24 89 - -
Bach5g00785 159 ProSitePatterns Zinc finger C2H2 type domain signature. 47 67 IPR013087 -
Bach5g00785 159 Coils Coil 66 86 - -
Bach5g00785 159 SUPERFAMILY beta-beta-alpha zinc fingers 42 72 IPR036236 -
Bach5g00785 159 ProSiteProfiles Zinc finger C2H2 type domain profile. 45 72 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00785 Bach-Chr5 5371898 5372377 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00785 1 159 C2H2 Transcription Factor Family AT5G57520 48.214 1.36e-31 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach5g00785 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00785 - - vra:106768043 153.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00785 5 5371898 5372377 Bach5g00785 5 5371898 5372377 ECH