Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00777 ATGGGTCGAGCTCCTTGCTGTGACAAAGCCAATGTGAAGAAAGGGCCTTGGTCTCCAGAAGAGGATGCCAAGCTCAAAGCCTATATTGAAACATATGGAACTGGAGGAAATTGGATTGCTCTTCCCCAGAAAATTGGGCTCAAGAGATGTGGGAAGAGTTGCAGGCTTCGATGGTTAAATTACCTGAGGCCTAACATCAAGCATGGTGGATTTACTGAAGAAGAAGACAACGTCATCTGCAACCTCTACATTAGCATTGGCAGCAGGTGGTCCATTATTGCAGCACAGCTGCCTGGAAGGACAGACAACGACATCAAGAATTACTGGAACACCAGCTTAAGGAAGAAACTACTTGGGAGGAACAAACAGTCCCACTTTCATCCCAGAAACACGAACGGGTTAATAGAAGAGAATCCATATCTAAATGCCCTAAGCAGCTCAGCTCTTGAGAGACTTCAACTGCATATGCAATTGCAGAGCCTTCAAAATCCTTTCTCTTTCTACAATAACCCTGCACTGTGGCCCAAGTTGCATCCTTCCCAAGAAAAGATGATCCATAGCTTACAATCCTTCAATGGTAGCTCTAACCCTTTGATGCAAAATGCTTTGCTTTCTACCCAAGCCGAGCAAGGATCTCCAAAAGCTGAAGTTTATAAACCAGCTACTGCTGGTGATGCAGTTCAACAAGATCCTATAAAGATTAATAGTCCCACAGTTGATCTTCTGGAGAATTCTTCGAATGGAATATCATCCATGGATAACTCGGTTCCCTTCATGGGTACTGGAAATAAAAATCCATTGGATTCAAACCTTGCACCAAAAGGGAATGGTGTTGAGCAGTCTAGTGTGGGAATTCAGCAAGTTTGCGCACTGCAAGCTGAGCTAGATGACATTCTCAACAACAGAACAATGAGTTATAATCCACAGGAAGATCAGATGGCTGAATTTGATTGTTTCAGAGAAATTAACGGCTCAAAGGAAAGCTTGATGTGGTGGTCCAATGATTTTGACACAAAATCAGCATCCTCAAACTCTTGGGATTCAACTACTCCTGTTCTTCAGACAGATCAGGGGATGTTTCAAGATTATGAACTAGGTTACAGTTTGTAG 1110 0.4306 MGRAPCCDKANVKKGPWSPEEDAKLKAYIETYGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFTEEEDNVICNLYISIGSRWSIIAAQLPGRTDNDIKNYWNTSLRKKLLGRNKQSHFHPRNTNGLIEENPYLNALSSSALERLQLHMQLQSLQNPFSFYNNPALWPKLHPSQEKMIHSLQSFNGSSNPLMQNALLSTQAEQGSPKAEVYKPATAGDAVQQDPIKINSPTVDLLENSSNGISSMDNSVPFMGTGNKNPLDSNLAPKGNGVEQSSVGIQQVCALQAELDDILNNRTMSYNPQEDQMAEFDCFREINGSKESLMWWSNDFDTKSASSNSWDSTTPVLQTDQGMFQDYELGYSL 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00777 369 Gene3D - 70 134 - -
Bach5g00777 369 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Bach5g00777 369 PANTHER OS09G0431300 PROTEIN 1 352 - -
Bach5g00777 369 CDD SANT 71 113 IPR001005 -
Bach5g00777 369 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Bach5g00777 369 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Bach5g00777 369 MobiDBLite consensus disorder prediction 208 234 - -
Bach5g00777 369 CDD SANT 16 62 IPR001005 -
Bach5g00777 369 Gene3D - 7 68 - -
Bach5g00777 369 SMART sant 13 64 IPR001005 -
Bach5g00777 369 SMART sant 67 115 IPR001005 -
Bach5g00777 369 FunFam Transcription factor RAX3 7 68 - -
Bach5g00777 369 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Bach5g00777 369 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Bach5g00777 369 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Bach5g00777 369 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00777 Bach-Chr5 5317201 5318624 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00777 1 179 MYB Transcription Factor Family AT5G57620 77.957 2.92e-100 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach5g00777 Myb_DNA-binding 2e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00777 K09422 - gmx:778083 529.635