LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach5g00773	ATGGGGTTTGCAAACAACGTTGGCAAGTATCGGCTTGGTCGGACAATTGGAGAAGGTACATTCGCCAAGGTTAAGTTGGGTGTCAACAGCAACAATGGCCAATATGTCGCCATGAAGATCATTGATAAGCTAATGGTCATGAAAAGTAATCTGAAGTATCAGGCAGGCTTCAGTGTCCTTCTGTTTTTCTCTTCTCCTTCCACAAAGAAGCACAATCATGTGCCATTATTTCCTATATTAACAATGCATTATGAACATGTGTCAGGTCCAAAGAGAGATAAGAACAATGAAGCTTCTGCATCATCCAAATATAGTAAGAATTCACGAGGAGGACGACTATCAGACAAGATTTCTTATGTCAGGAAGTTGGAAGAGTGCGAGGGAAGGAAACTTTTCCAGCAACTAATTGATGCTGTTGACTACTGCCATAACAAAGGAGTTTACCATAGAGATCTCAAGCCAGAAAACTTGCTTCTAGACAACAGTGGGAATCTCAAAGTGTCCGACTTTGGACTCAGCGCACTGCGAAAGCCTAATGATGTTTTAACCACGGCGTGTGGCTCTCCATGCTATGTGGCACCTGAGCTGCTGTGGAGCAAGGGCTACGATGGAGCAGCTGCAGATGTTTGGTCATGTGGGGTAATCCTATTTGAATTGCTTGCAGGTTATCTACCATTTAACGACCAAAGCTTGATGAACTTGTATAAGAAGATAACCAGAGCAGACTACGCATGTCCACCATGGTTTACACAAAGTCAGAAGAAACTAATTGCCAGATTGCTGGAACCAAATCCTAGAAAGAGGATAACTTTATCAGAGATTGTTGAAGATGAATGGTTTCAAACAGATTATGTTCCTGCTTGCGAATATGAAAGTGATGAAGACATTTACTTGGATGATGTTAATGCTGCCTTTGATTCAGCTGAGGAGAAAGTGACAGAGAAAACAGTAACCAAGTCCCCAAGTTTCATAAACGCTTTCCAGTTAATAGCCATGTCCCAGGATCTTGATCTATCAGGCCTTTTTGAAGAACAGGATCACAAAAAGCAGACAACAAGGCTTGGATCCAAGCACACTATCAACGAAACCATAGAAAAAATAGAAGCTGCAGCAACAGATGTGAGACTGTCAGTAGAAAGAATAAAAAACTCCAAGATAAAAATGCATCCCAAACAGACAATGACTAGATGTTCTAGATCATATTTTGACCTATCAGCAGAGGTGATTGAAGTTGCTCCAACTCATTGTGTTGTAGAGATATCTAAATCATCAGGAGACCTAAGAATGTACACTGAATTCTGCAAAAGTCTATCAACTCTGCTGATCAAAAACTCTGGTGTGCCATCACAAACACAAGAGTCTGTGGAAGTACACGTCACTAGCAAAATTGACCAAGATGCTGGAAGCTCGGAAGAGTCAAATTGTGAACACAAGAAAGACCTGCATGGCTATGCATCTGCTTAAAGATAAGCTATACAGTCTATACTCATGTATCTGTCATTCTTTCAGTAAAGATTATACAAGTACAAGAAGCATAGGGAAAGGGATTTTTTGATTGTGAATGTAATCAAAACAATGGCTTTTGCTTCAAGTGTTTATTCTTTT	1605	0.4037	MGFANNVGKYRLGRTIGEGTFAKVKLGVNSNNGQYVAMKIIDKLMVMKSNLKYQAGFSVLLFFSSPSTKKHNHVPLFPILTMHYEHVSGPKRDKNNEASASSKYSKNSRGGRLSDKISYVRKLEECEGRKLFQQLIDAVDYCHNKGVYHRDLKPENLLLDNSGNLKVSDFGLSALRKPNDVLTTACGSPCYVAPELLWSKGYDGAAADVWSCGVILFELLAGYLPFNDQSLMNLYKKITRADYACPPWFTQSQKKLIARLLEPNPRKRITLSEIVEDEWFQTDYVPACEYESDEDIYLDDVNAAFDSAEEKVTEKTVTKSPSFINAFQLIAMSQDLDLSGLFEEQDHKKQTTRLGSKHTINETIEKIEAAATDVRLSVERIKNSKIKMHPKQTMTRCSRSYFDLSAEVIEVAPTHCVVEISKSSGDLRMYTEFCKSLSTLLIKNSGVPSQTQESVEVHVTSKIDQDAGSSEESNCEHKKDLHGYASA	487

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach5g00773	487	SUPERFAMILY	Protein kinase-like (PK-like)	7	329	IPR011009	-
	Bach5g00773	487	ProSitePatterns	Protein kinases ATP-binding region signature.	16	48	IPR017441	GO:0005524
	Bach5g00773	487	PANTHER	CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED	8	432	-	-
	Bach5g00773	487	ProSiteProfiles	Protein kinase domain profile.	10	280	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach5g00773	487	Gene3D	Kinase associated domain 1, KA1	318	443	-	-
	Bach5g00773	487	CDD	CIPK_C	325	443	-	-
	Bach5g00773	487	SMART	serkin_6	10	280	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach5g00773	487	Gene3D	Phosphorylase Kinase; domain 1	3	60	-	-
	Bach5g00773	487	ProSiteProfiles	NAF domain profile.	319	343	IPR018451	GO:0007165
	Bach5g00773	487	MobiDBLite	consensus disorder prediction	463	487	-	-
	Bach5g00773	487	FunFam	Non-specific serine/threonine protein kinase	319	444	-	-
	Bach5g00773	487	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	147	159	IPR008271	GO:0004672\|GO:0006468
	Bach5g00773	487	MobiDBLite	consensus disorder prediction	88	111	-	-
	Bach5g00773	487	FunFam	Non-specific serine/threonine protein kinase	108	287	-	-
	Bach5g00773	487	Gene3D	Transferase(Phosphotransferase) domain 1	109	302	-	-
	Bach5g00773	487	MobiDBLite	consensus disorder prediction	469	487	-	-
	Bach5g00773	487	Pfam	NAF domain	321	379	IPR004041	GO:0007165
	Bach5g00773	487	Pfam	Protein kinase domain	10	280	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach5g00773	Bach-Chr5	5297171	5299975	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach5g00773	110	441	CBL-interacting serine-threonine protein kinases	AT5G57630	63.174	1.11e-145	418

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CAMK_CAMKL-CHK1	Bach5g00773		Pkinase	6.1e-52	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach5g00773	-		-	qsa:O6P43_022288	630.557