Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00769 CCACTTTTGCGGTGTTTCTAGTTCTAGCAATATCAAACCAAGTAGCAAGTCCACCACTAGCCGTAGCACCGGCCGCCAAAGATAACTCGGCTTCAGCTACGTTTTGACTTTTCACTCGAGGTCAAAGACTGTGTTTTTGGAGATGGGAATTGAGCGAGCAGGCCTCAAGGGTTTTAGGAGTGGGTGGAGGATGCTGGTGAAGCCGTGTGACTCCTGCAAATCGGCGGCGGCGGCGGTGTTTTGCCGTGCCGACTCGGCGTTCTTATGCATGGCGTGTGACAACAAAATCCACTGCGCCAATAAGCTGGCTTCCCGCCACGAGCGCGTGTGGATGTGCGAGGTGTGCGAACAAGCCCCCGCCTCCGTCACGTGCAAAGCGGACGCGGCTGCTCTGTGCGTCACGTGCGATTCAGATATCCACTCAGCCAATCCTCTTGCACGTCGCCACGAGCGTGTTCCGGTGGAGCCATTCTTCGACTCGGCGGAGTCGATGGTGAAATCCTCGGCGGCTTTTAACTTCCTTGTTCCAACTGATGATGGGGTTGGATCCGATGGGTTCAACCAGGAAGATTCTGACGCAGCGTCGTGGCTCATTCCCAACCTGAATTTCAATTCGAAGATGGTGGATGGTCCAGATGTCAAGTCCGGGGAAATATTCTTCTCCGAAATGGATCCATTTCTGGAATTTGATTACTCAAATTCATTTCAGAATAACAACAGCGCAGGTAATGATAGCGTGGTGCCAGTTCAAAGCAAACCCGCTCCGTTGCCGGTGGTCAATCACTCCGAGACTTGCTTCGACATCGATTTTTGCAGATCCAAGCTTTCTTCCTTTAATTACCCAACTCATTCAATTAGCCAAAGCGTTTCATCTTCTTCGCTTGACGTTGGTGTGGTTCCAGAGGGAAACACGGTTTCAGAAATTTCCTACTCTTTGGGCAGAAACATTAGCAACAGTTCGGATTCAAGTGGAATGGTGTCTGCGGGAAATATTAACCAAGCGAATCAGTTATGTGGCATGGACCGGGAAGCTAGGGTGTTGAGGTACAGAGAGAAGAGGAAGAACAGAAAATTTGAGAAAACCATTCGCTACGCTTCCAGAAAGGCATACGCCGAAACCCGCCCAAGAATCAAGGGCCGCTTCGCCAAACGGACCGAAATTGATTCGGAGGTGGACCGCCTCTATGGCTCTGCGCCTGTCGCCCCATCATCCCTCATGCTCGATGCTCAATACGGCGTCGTACCTTCGTTTTAATCAATCATTTTCTGTAACTCTAGTATGTGAAACCTGCAAAATCCGGTGTTCGATGCCTTCTGGCTGCTAATTATTTGAACTTAATCAGTGCCTAACGTCGTGTTCACTGTTTGGATTCGCGGAGCTGTAGGTCGTTGAGGTCAAGGACGACGCTGCTGAACTTTTACACACCTGAAGATTTCCCTCCCT 1444 0.5048 MGIERAGLKGFRSGWRMLVKPCDSCKSAAAAVFCRADSAFLCMACDNKIHCANKLASRHERVWMCEVCEQAPASVTCKADAAALCVTCDSDIHSANPLARRHERVPVEPFFDSAESMVKSSAAFNFLVPTDDGVGSDGFNQEDSDAASWLIPNLNFNSKMVDGPDVKSGEIFFSEMDPFLEFDYSNSFQNNNSAGNDSVVPVQSKPAPLPVVNHSETCFDIDFCRSKLSSFNYPTHSISQSVSSSSLDVGVVPEGNTVSEISYSLGRNISNSSDSSGMVSAGNINQANQLCGMDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTEIDSEVDRLYGSAPVAPSSLMLDAQYGVVPSF 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00769 370 CDD Bbox1_BBX-like 65 107 - -
Bach5g00769 370 Pfam B-box zinc finger 62 107 IPR000315 GO:0008270
Bach5g00769 370 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 21 351 IPR045281 GO:0009909
Bach5g00769 370 CDD Bbox1_BBX-like 21 64 - -
Bach5g00769 370 SMART bboxneu5 65 107 IPR000315 GO:0008270
Bach5g00769 370 SMART bboxneu5 17 64 IPR000315 GO:0008270
Bach5g00769 370 ProSiteProfiles CCT domain profile. 295 337 IPR010402 GO:0005515
Bach5g00769 370 ProSiteProfiles Zinc finger B-box type profile. 22 64 IPR000315 GO:0008270
Bach5g00769 370 Pfam CCT motif 295 337 IPR010402 GO:0005515
Bach5g00769 370 ProSiteProfiles Zinc finger B-box type profile. 60 107 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00769 Bach-Chr5 5267655 5269208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00769 1 370 C2C2-CO-like Transcription Factor Family AT5G57660 54.331 2.30e-124 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Bach5g00769 zf-B_box 4.5e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00769 - - gmx:100805693 574.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00769 5 5267655 5269208 Bach5g00769 5 5267655 5269208 ECH