Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00765 ATGGCAAAGAACTCAGAGTACCTTCTTTCTTGGTTTCTCTTGCTTCATCTGTTGCAGATAGGAACTGGAAATGCGTCAAATGAAGTGAGTGCAACTTCCATGGGTGTGATCAAATTGAGAATAGGGGTGCCCAAGAAATATGGCTTCACCCAATTTGTCAATGTACGCTGGGAGCAGCGTGAGCACAAGTACAATGTCTCTGGATATTGCATAGATGTTTTCAACGCCGTCACAAAGATCTTGCCTTTCAATGTTTCTCCTGAATTTGAACCTTACGTTGATGAAACAGGGAACAGTGCAGGGAATTACGATTCACTTGTCCAACAGATTCCTAAAAAGTATGATGCAGTGGTAGGAGATGTAACAATAGTGGCCAACCGTTCAAAATTCGTTGATTTTACATTGCCATATACAGAGTCAGATGTGTGCATGCTAGTCCCAATTCAACATGGGAGGCACTCGAGCATGTGGATTTTTGTTAGACCCTTCGCCTGGGATCTTTGGCTCTGCATAGTCTTACTCAACATCTTCATAGGGGTCGTCATACTCATCATGGAACGAAATGTACATAATGTGTCTGAGGATGGTTCGCCAATTCGCAAAGATCTCAGCATAGTGAGCCTCTTATGGTTTCCATTATCACAAGCTGTGCTTCCTGAGAGAGAGGTGGCTGTGAAGAACTGCTCCAGATTTGTGTTGATGGTTTGGTTACTATTGGCATTCGTTCTAATGCAAAGTTACACAGCAAACTTGACGTCTATCTTGACGTTAGATCAGCTGCAACCCACTCATCTCAGCGTTAATGCTCTGAAAAAGAGAGGTTATTATGTTGGGTATCAAACCGGTTCTTTTGTTGAAGATCTTTTGGTACAGAGATTGAAGTTTGACCAACACAAGCTTAGGCCATATGGCAATATTTCTGAGTATCACCATGCATTGAAACTTGGAAGCCAAGGAGGAGGTGTTGCAGCTATATTTGATGAACTACCCTATCTCAAAGTCTTCCTCCAGAAGTTCGGATCCGATTACATGTTGGCTGGACCCACATATCGAACGGACGGGCTTGGTTTTGTATTCCCGTTTAACTCCAATTTGACCTCTTACTTTTCGAGAGCCATCTTAAACGTGATCGAGAGTGATGTAATGGATCAGATTGAGCAAAAATATTTTGGAAAAAATGATGGAGTAGTCCAAGATCAATCTGGAAATTCAATCTCGTCTGATACTCCAAGCCTCACATCTTACAGCTTTGCAGGGCTCTTCTTACTCACAGGAATAGCTACGCTACTTGCACTGGCGATCTCAGAAAGTGTCACTCTGCAAAAACCCATTTTAATGGCTAGAAGTTATAGTCAAAGATATTTGTTCGGTAGTTCGCGTTCTAGGGTCACAGATGATTCTAAAATAGAAACCGGAAGACATGTTAGTTCAAGTTCAAAAGATGAAGCCCGAGAAGGTTAG 1461 0.4223 MAKNSEYLLSWFLLLHLLQIGTGNASNEVSATSMGVIKLRIGVPKKYGFTQFVNVRWEQREHKYNVSGYCIDVFNAVTKILPFNVSPEFEPYVDETGNSAGNYDSLVQQIPKKYDAVVGDVTIVANRSKFVDFTLPYTESDVCMLVPIQHGRHSSMWIFVRPFAWDLWLCIVLLNIFIGVVILIMERNVHNVSEDGSPIRKDLSIVSLLWFPLSQAVLPEREVAVKNCSRFVLMVWLLLAFVLMQSYTANLTSILTLDQLQPTHLSVNALKKRGYYVGYQTGSFVEDLLVQRLKFDQHKLRPYGNISEYHHALKLGSQGGGVAAIFDELPYLKVFLQKFGSDYMLAGPTYRTDGLGFVFPFNSNLTSYFSRAILNVIESDVMDQIEQKYFGKNDGVVQDQSGNSISSDTPSLTSYSFAGLFLLTGIATLLALAISESVTLQKPILMARSYSQRYLFGSSRSRVTDDSKIETGRHVSSSSKDEAREG 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00765 486 MobiDBLite consensus disorder prediction 462 486 - -
Bach5g00765 486 Gene3D - 32 155 - -
Bach5g00765 486 Pfam Bacterial extracellular solute-binding proteins, family 3 64 392 IPR001638 -
Bach5g00765 486 Gene3D - 156 299 - -
Bach5g00765 486 Gene3D - 341 397 - -
Bach5g00765 486 SMART GluR_14 38 392 IPR001320 GO:0015276|GO:0016020
Bach5g00765 486 FunFam Glutamate receptor 2.7 34 155 - -
Bach5g00765 486 MobiDBLite consensus disorder prediction 463 486 - -
Bach5g00765 486 SUPERFAMILY Periplasmic binding protein-like II 13 393 - -
Bach5g00765 486 CDD GluR_Plant 38 390 - -
Bach5g00765 486 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 38 435 IPR015683 -
Bach5g00765 486 Pfam Ligand-gated ion channel 393 427 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00765 Bach-Chr5 5238047 5239945 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00765 38 453 Ion Channels AT5G11210 37.081 4.39e-89 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00765 K05387 - qsa:O6P43_002910 572.392