Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00762 ATGGAATTGAAAAAGGGAAGGCTTGTCAGGTTCTATTCTGATGGAAAAAAGCAAAAAGAACCATCAAGACTTGAGAAGTCGTCATCTGCATACAAGGTTTCCTTATCTTCCTATGCACTCCCATGGGGGAGAAATAGATTTACTGAAACTTTTAAAGTTGGGGGATCTAAGGTATTTCCAGAGGACCATGAGCCATGGCGTAAAAGAATACTGGACCCAGGAAGTGAGATAGTATTAAAATGGAACCGGGTCTTCATTGTTTCATGTTTGGTGGCTCTTTTTGTTGATCCATTGTATTTTTACTTGCCCAGTGTGAGAGGGAATACTGAGTCTTTATGTGTGAGGACAGACCTAAACTTGCGGATTGTAGTGACATTTTTTCGGACTATTGCGGACATTTTTTATCTGTTGCACATGGTGATAAAGTTCAGGACAGCATATGTGGCTCCAAGCTCTCGGGTGTTTGGCAGGGGTGAACTTGTTATGAACCCAAAGAAAATCGCAAGGAGATATATCAAATCTGATTTCTTCATTGATTTTATTGCCACGTTGCCTCTTCCACAGATGGTTATCTGGTTTATTATACCAGCAACAAGAAGCTCTCAGACAGATCATAAGAATAATGCTCTTGCTTTGATTGTTCTTCTCCAATATATTCCTCGATTATATTTGATATTTCCACTGAGTTCTCAAATAATCAAAGCAACAGGAGTGGTTACAAAGACTGCCTGGGCAGGAGCTGCATATAATCTGTTATTGTATATGTTGGCTAGCCATGTTCTTGGGGCTGCATGGTATGTTCTTTCTGTCGACAGGTATACCTCATGTTTGAAATCCATTTGCAAAAGGGAATCAAGCCCAGAAAAATGCTTTCTTAACTACCTGGACTGTAGTTCTTTAAATCTTGATAAGCGCAGATTATGGGAAAATAGTACAAGTGTATTTAAGAAATGTGATCCTAGTAATGGAATTGAATTCAAGTATGGCATATTTGAAAAAGCAGTGACAACAAACGTAGTCTACTCAGATTTCATTCCAAAGTACTTATATTGTTTATGGTGGGGGCTGCAGCAACTAAGTTCTTATGGGCAGAATTTATCTACAAGCACCTTTATTGGAGAAACGTCATTTGCTATACTCATCGCCATCATGGGTCTTGTATTATTTGCCCATTTGATTGGGAACATGCAGACATATTTACAATCAATCACTAGAAGACTTGAGGAGTGGAGGCTTAAGCGAAGAGACACCGAGGAGTGGATGAGGCATCGGCAACTTCCTGAAGATTTGAAACAACGTGTTCGACGCTTTGTTCAGTATAAGTGGGTTGCAACTCGTGGAGTTGATGAAGAAACCATTCTACAAGGATTACCTGCCGATCTACGCCGTGATATCCAACGACACCTATGCTTAGACCTTGTTCGACGAGTTCCCTTCTTCTCTCAGATGGATGATCAGCTACTTGATGCAATATGTGAGCGACTGATATCCTCTTTGAGCACTCAAGGGACCTACATTGTTCGTGAGGGTGACCCTGTAACCGAAATGCTCTTTATTATCAGAGGAAGACTTGATAGTTCTACTACAAATGGAGGCAGGACTGGTTTCTTTAACTCAATCATATTGAGACCTGGAGATTTTTGCGGTGAGGAACTGCTTGCATGGGCTTTACTCCCAAAATCAACAGGAAACTTGCCTTCTTCAACTAGAACAGTTAAAGCTCTTAGCGAGGTTGAAGCTTTTGCTCTGCGAGCTGAAGACCTCAAATTTGTTGCTAATCAATTTAGGCGCCTTCACAGCAAGAAGCTGCAGCACACCTTTCGATTTTATTCTCACCATTGGAGAACTTGGGCTGCTTGCTTCATTCAGGCTGCTTGGCGTCGATATAAGAAAAGGAAGTCTGCCAAAGATCTCAGCATGAGGGAAGCACTTGCCTTGGAAGAGACAGAAACCAATGAGACAGAGCAGGAAGAACATTCTGCTGGTTCAAATTCTTCTCAAGCTAAATTGAACCTTGGAGTCACAATACTTGCTTCAAGGTTTGCTGCAAACACAAGAAGAGGAGCTCAGAAGATTAAGGACAACCTGCCAAAGTTACAGAAACCTGACGAACCCGACTTTTCCACTGAAGTTGATGATGACTAG 2145 0.414 MELKKGRLVRFYSDGKKQKEPSRLEKSSSAYKVSLSSYALPWGRNRFTETFKVGGSKVFPEDHEPWRKRILDPGSEIVLKWNRVFIVSCLVALFVDPLYFYLPSVRGNTESLCVRTDLNLRIVVTFFRTIADIFYLLHMVIKFRTAYVAPSSRVFGRGELVMNPKKIARRYIKSDFFIDFIATLPLPQMVIWFIIPATRSSQTDHKNNALALIVLLQYIPRLYLIFPLSSQIIKATGVVTKTAWAGAAYNLLLYMLASHVLGAAWYVLSVDRYTSCLKSICKRESSPEKCFLNYLDCSSLNLDKRRLWENSTSVFKKCDPSNGIEFKYGIFEKAVTTNVVYSDFIPKYLYCLWWGLQQLSSYGQNLSTSTFIGETSFAILIAIMGLVLFAHLIGNMQTYLQSITRRLEEWRLKRRDTEEWMRHRQLPEDLKQRVRRFVQYKWVATRGVDEETILQGLPADLRRDIQRHLCLDLVRRVPFFSQMDDQLLDAICERLISSLSTQGTYIVREGDPVTEMLFIIRGRLDSSTTNGGRTGFFNSIILRPGDFCGEELLAWALLPKSTGNLPSSTRTVKALSEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSHHWRTWAACFIQAAWRRYKKRKSAKDLSMREALALEETETNETEQEEHSAGSNSSQAKLNLGVTILASRFAANTRRGAQKIKDNLPKLQKPDEPDFSTEVDDD 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00762 714 Pfam Ion transport protein 81 406 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bach5g00762 714 SUPERFAMILY cAMP-binding domain-like 408 601 IPR018490 -
Bach5g00762 714 MobiDBLite consensus disorder prediction 691 706 - -
Bach5g00762 714 SMART cnmp_10 479 610 IPR000595 -
Bach5g00762 714 CDD CAP_ED 479 610 IPR000595 -
Bach5g00762 714 FunFam Cyclic nucleotide-gated ion channel 1 477 595 - -
Bach5g00762 714 ProSiteProfiles cAMP/cGMP binding motif profile. 479 609 IPR000595 -
Bach5g00762 714 ProSiteProfiles IQ motif profile. 615 643 IPR000048 GO:0005515
Bach5g00762 714 SUPERFAMILY Voltage-gated potassium channels 75 401 - -
Bach5g00762 714 Gene3D Jelly Rolls 477 597 IPR014710 -
Bach5g00762 714 Pfam Cyclic nucleotide-binding domain 502 590 IPR000595 -
Bach5g00762 714 Gene3D - 84 404 - -
Bach5g00762 714 FunFam Cyclic nucleotide-gated ion channel 1 406 470 - -
Bach5g00762 714 MobiDBLite consensus disorder prediction 688 714 - -
Bach5g00762 714 MobiDBLite consensus disorder prediction 647 667 - -
Bach5g00762 714 Gene3D Helix hairpin bin 406 470 - -
Bach5g00762 714 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 62 707 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00762 Bach-Chr5 5198706 5203676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00762 1 713 Ion Channels AT4G30360 70.702 0.0 1031
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00762 K05391 - gmx:100808425 1208.36