LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach5g00743	ACCCACTCACGTCTCTCAATTTCTGCGCACAACACACTACCCTCACTTGACAACTCGTATCATCCATCTGATTCGCCCTGCTTTGTTTTCTCTCACTTTTCTCCCCTAGTTTTTATTCATTTTGTTTTAAAGCAAGAGAGGTGACTGAAAAAGTGTGTGAAGGAACCAAGGAGAAAAGAGAAGAGGGAAAACACACTGCAACCCAACAAAGAAAAAGAAAAGTAAAAATTTTGGGTTTGTGTGTGAGAATTGCTTTAACTTTAGTTTCTTTCATGGTCTTTCTGAAGTATGGTCTCTACGACTGCTCTGTAACTATGGCTTCCAATTGGGTTTTTCTTCTCTGTTTTCTCTTGTGTGCTGGACTTGGTTTCTCTTACGAGCCTCGCAACCATGAAGTGGAGGCTTTGATGAGCGTAAGAGCGGCTCTGAATGATCCACACGGGGTGTTGAGCAATTGGGATGAGTACTCGGTGGACCCTTGCAGCTGGGCTATGATCACTTGCTCATCTGACTCCCTTGTTGTTGGCCTGGGAGCCCCAAGCCAGTCTCTTTCTGGAACTTTATCTGGCGCCATTGGAAATCTGACAAATCTTCGACAAGTGTTACTGCAGAACAACAATATCTCTGGAAAAATTCCTTCGGAGCTTGGCACCCTTCCCAAGCTTCAGACTTTAGATCTTTCCAACAATCGTTTCTCCGGTGCCATTCCAGGGTCTCTCAGTCAGCTAAAAGGTCTCCAGTACCTGAGGCTGAACAACAATAGCTTGTCTGGGCCCTTTCGTATGTCACTATCCAAAGTACCCCAGCTTGCTTTCTTGGACTTGTCCTATAACAATATCAGTGGACCGTTACCCAAATTTCCAGCCAGATCATTCAATGTTGTGGGAAATCCACTACTTTGTGGAAGCGGTTCTTCCGAAGGTTGCTATGGATCAACAACCCTTATGCCTGTTTCCTTATCTCTATCATCATCAGAAGGTATACACAAGTCCAAGAAACTAGGAATCGCTCTGGGGGTCAGCCTTGGTTGCGTTAGTCTCGTACTCCTCTTATTGGGGCTCTTATGGTATAGAAAGAGACAACCGCTTCGAGCCATATTATACATCAGTGATTGTCAGACAGAGGGACTTGTCAGCTTGGGAAACCTCAAGAACTTCACTTTCAGAGGGCTCCAAAATGCAACAGATCATTTCAGCTCAAAGAACATACTTGGCGCTGGAGGTTTTGGCAATGTTTACAGGGGGAAGCTTGGAGATGGGACTATGGTAGCAGTGAAAAGGCTGAAGGATGTAACTGGAAGTGCTGGTGAATCACAGTTTCGAACTGAACTGGAGATGATTAGCTTGGCAGTTCACCGAAATTTACTTCGCTTAATTGGATATTGTGCTACTCCTAACGAAAAGCTTCTGGTTTATCCTTATATGTCTAATGGTAGTGTGGCAACCAGGCTTAGAGGTAAGCCTGCTTTAGATTGGAACTCAAGAAAGAGGATAGCAATCGGAGCTGCCAGAGGACTTCTATATTTACATGAGCAATGTGATCCAAAGATAATTCACAGAGATGTGAAGGCTGCTAATGTGCTTCTGGATGAATTTTGTGAGGCTGTTGTTGGTGATTTTGGCCTTGCAAAGCTTCTTGACCATGCTGACTCCCATGTCACAACTGCTGTCCGTGGCACTGTTGGGCATATTGCTCCGGAGTACCTCTCCACTGGCCAATCATCTGAGAAAACTGATGTATTTGGATTTGGCATTCTCTTGCTAGAACTCATAACTGGAATGACAGCTTTGGAGTTTGGGAAAACAGTGAATCAGAAAGGTGCAATGCTAGAGTGGTTAAGAAAATACAGAATGAAAAGAAGGTTGAAGTGTTGGTGGATAAAGAGCTAGGGAGGAACTATGACGGGATTGAAGTAGGAGAGATGCTGCAAGTAGCTTTACTTTGCACTCAATATCTACCAGCACACCGGCCCAAAATGTCTGAGGTGGTCCGAATGCTTGAAGGTGATGGCCTTGCTGAGAAGTGGGCAGCATCACATAATCATGGTACTCTCAGCATGAACTCCCACAGCAACAACCATACCAACAGTTCATCCCGCCCTACCACTGCTTCAAAACATGATGACAGTGTCCATGATCGTTCCAGCATGTTCGGCATGGCAATGGATGATGATGACGACGAACATTCTTTGGATTCCTATGCTATGGAACTCTCTGGTCCTAGATAAACAGAAACTGGAAAAGAAAGACACCAACATAGAAAAGGGAAGAATGAATTCTTTTGCTCATAATCATAATTTTTTTTAAAAAGGGTAAACTTACTTTTCCAGGATATAATCATGTATATGCTTATGATGATGTAAATATTGGTACTTGCTTATGTTCCCGTGTCTTTGGGTTCAAAGTAGAAAGTGAAAGGGAATATAGTAGGTAGGTAGTGTGCTATGCGCAGAATGGACTTTGTATAGGAGTGGACACAAGAAAATCATCTGATTCTCTGTTCTCAAGTATGAAGCAGCAGCAGAGGCAGAGGGTCTCGTCCATGGATATTGACGGTTTTGGATCAAAATGGGCATCACATTTCCACCGGCTTAAATCTAGCTTGGCTGTTATGTTCAAAATTAGAGTGATGGTCACAGCAGTCAGAGATTTAG	2653	0.4369	MVFLKYGLYDCSVTMASNWVFLLCFLLCAGLGFSYEPRNHEVEALMSVRAALNDPHGVLSNWDEYSVDPCSWAMITCSSDSLVVGLGAPSQSLSGTLSGAIGNLTNLRQVLLQNNNISGKIPSELGTLPKLQTLDLSNNRFSGAIPGSLSQLKGLQYLRLNNNSLSGPFRMSLSKVPQLAFLDLSYNNISGPLPKFPARSFNVVGNPLLCGSGSSEGCYGSTTLMPVSLSLSSSEGIHKSKKLGIALGVSLGCVSLVLLLLGLLWYRKRQPLRAILYISDCQTEGLVSLGNLKNFTFRGLQNATDHFSSKNILGAGGFGNVYRGKLGDGTMVAVKRLKDVTGSAGESQFRTELEMISLAVHRNLLRLIGYCATPNEKLLVYPYMSNGSVATRLRGKPALDWNSRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDEFCEAVVGDFGLAKLLDHADSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMTALEFGKTVNQKGAMLEWNEKKVEVLVDKELGRNYDGIEVGEMLQVALLCTQYLPAHRPKMSEVVRMLEGDGLAEKWAASHNHGTLSMNSHSNNHTNSSSRPTTASKHDDSVHDRSSMFGMAMDDDDDEHSLDSYAMELSGPR	646

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach5g00743	646	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	426	438	IPR008271	GO:0004672\|GO:0006468
	Bach5g00743	646	FunFam	Putative LRR receptor-like serine/threonine-protein kinase	38	220	-	-
	Bach5g00743	646	ProSitePatterns	Protein kinases ATP-binding region signature.	313	335	IPR017441	GO:0005524
	Bach5g00743	646	SUPERFAMILY	Protein kinase-like (PK-like)	289	572	IPR011009	-
	Bach5g00743	646	Gene3D	Transferase(Phosphotransferase) domain 1	384	590	-	-
	Bach5g00743	646	MobiDBLite	consensus disorder prediction	586	646	-	-
	Bach5g00743	646	MobiDBLite	consensus disorder prediction	586	608	-	-
	Bach5g00743	646	MobiDBLite	consensus disorder prediction	609	628	-	-
	Bach5g00743	646	SUPERFAMILY	L domain-like	39	286	-	-
	Bach5g00743	646	Gene3D	Ribonuclease Inhibitor	38	220	IPR032675	-
	Bach5g00743	646	FunFam	Somatic embryogenesis receptor kinase 1	277	383	-	-
	Bach5g00743	646	PANTHER	SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1	19	582	-	-
	Bach5g00743	646	Pfam	Leucine rich repeat N-terminal domain	39	78	IPR013210	-
	Bach5g00743	646	Gene3D	Phosphorylase Kinase; domain 1	278	383	-	-
	Bach5g00743	646	ProSiteProfiles	Protein kinase domain profile.	307	589	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach5g00743	646	FunFam	Somatic embryogenesis receptor-like kinase 1	384	591	-	-
	Bach5g00743	646	Pfam	Leucine rich repeat	129	189	IPR001611	GO:0005515
	Bach5g00743	646	Pfam	Protein tyrosine and serine/threonine kinase	310	571	IPR001245	GO:0004672\|GO:0006468
	Bach5g00743	646	SMART	serkin_6	307	571	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach5g00743	Bach-Chr5	5053531	5058512	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach5g00743	22	646	Receptor kinase-like Gene Family	AT5G16000	63.594	0.0	788

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-II	Bach5g00743		PK_Tyr_Ser-Thr	8.9e-41	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach5g00743	-		-	gmx:100797186	987.638